Xantholysin B

Details

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Internal ID 78389118-f59f-4029-95cc-9c3ca357ed33
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name 5-[[5-amino-1-[[1-[[1-[[5-amino-1-[[6,15-bis(3-amino-3-oxopropyl)-9,12,18-tris(2-methylpropyl)-2,5,8,11,14,17,20,23-octaoxo-3,21-di(propan-2-yl)-1-oxa-4,7,10,13,16,19,22-heptazacyclopentacos-24-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-[[2-(3-hydroxydecanoylamino)-4-methylpentanoyl]amino]-5-oxopentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C83H144N18O23/c1-18-19-20-21-22-23-49(102)39-65(107)88-55(34-41(2)3)75(115)93-54(28-33-66(108)109)70(110)89-52(26-31-63(86)105)73(113)99-67(46(12)13)81(121)96-59(38-45(10)11)78(118)91-51(25-30-62(85)104)72(112)98-60-40-124-83(123)69(48(16)17)101-74(114)53(27-32-64(87)106)92-76(116)56(35-42(4)5)95-79(119)57(36-43(6)7)94-71(111)50(24-29-61(84)103)90-77(117)58(37-44(8)9)97-82(122)68(47(14)15)100-80(60)120/h41-60,67-69,102H,18-40H2,1-17H3,(H2,84,103)(H2,85,104)(H2,86,105)(H2,87,106)(H,88,107)(H,89,110)(H,90,117)(H,91,118)(H,92,116)(H,93,115)(H,94,111)(H,95,119)(H,96,121)(H,97,122)(H,98,112)(H,99,113)(H,100,120)(H,101,114)(H,108,109)
InChI Key UBFQXDNOBHOEFV-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C83H144N18O23
Molecular Weight 1762.10 g/mol
Exact Mass 1761.06517291 g/mol
Topological Polar Surface Area (TPSA) 664.00 Ų
XlogP 3.00
Atomic LogP (AlogP) -1.43
H-Bond Acceptor 22
H-Bond Donor 20
Rotatable Bonds 49

Synonyms

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RefChem:195143
4-((2-((1,3-dihydroxydecylidene)amino)-1-hydroxy-4-methylpentylidene)amino)-4-((1-((1-((1-((1-((5,8,11,14,17,20,23-heptahydroxy-6,15-bis(2-(C-hydroxycarbonimidoyl)ethyl)-9,12,18-tris(2-methylpropyl)-2-oxo-3,21-bis(propan-2-yl)-1-oxa-4,7,10,13,16,19,22-heptaazacyclopentacosa-4,7,10,13,16,19,22-heptaen-24-yl)-C-hydroxycarbonimidoyl)-3-(C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)-3-methylbutyl)-C-hydroxycarbonimidoyl)-2-methylpropyl)-C-hydroxycarbonimidoyl)-3-(C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)butanoate
4-({2-[(1,3-dihydroxydecylidene)amino]-1-hydroxy-4-methylpentylidene}amino)-4-{[1-({1-[(1-{[1-({5,8,11,14,17,20,23-heptahydroxy-6,15-bis[2-(C-hydroxycarbonimidoyl)ethyl]-9,12,18-tris(2-methylpropyl)-2-oxo-3,21-bis(propan-2-yl)-1-oxa-4,7,10,13,16,19,22-heptaazacyclopentacosa-4,7,10,13,16,19,22-heptaen-24-yl}-C-hydroxycarbonimidoyl)-3-(C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-methylbutyl)-C-hydroxycarbonimidoyl]-2-methylpropyl}-C-hydroxycarbonimidoyl)-3-(C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}butanoate
5-((5-amino-1-((1-((1-((5-amino-1-((6,15-bis(3-amino-3-oxopropyl)-9,12,18-tris(2-methylpropyl)-2,5,8,11,14,17,20,23-octaoxo-3,21-di(propan-2-yl)-1-oxa-4,7,10,13,16,19,22-heptazacyclopentacos-24-yl)amino)-1,5-dioxopentan-2-yl)amino)-4-methyl-1-oxopentan-2-yl)amino)-3-methyl-1-oxobutan-2-yl)amino)-1,5-dioxopentan-2-yl)amino)-4-((2-(3-hydroxydecanoylamino)-4-methylpentanoyl)amino)-5-oxopentanoic acid
5-[[5-amino-1-[[1-[[1-[[5-amino-1-[[6,15-bis(3-amino-3-oxopropyl)-9,12,18-tris(2-methylpropyl)-2,5,8,11,14,17,20,23-octaoxo-3,21-di(propan-2-yl)-1-oxa-4,7,10,13,16,19,22-heptazacyclopentacos-24-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-4-[[2-(3-hydroxydecanoylamino)-4-methylpentanoyl]amino]-5-oxopentanoic acid
SCHEMBL31094320
CHEBI:221326

2D Structure

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2D Structure of Xantholysin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4739 47.39%
Caco-2 - 0.8576 85.76%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.5209 52.09%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8470 84.70%
OATP1B3 inhibitior + 0.8816 88.16%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9569 95.69%
P-glycoprotein inhibitior + 0.7419 74.19%
P-glycoprotein substrate + 0.8886 88.86%
CYP3A4 substrate + 0.7150 71.50%
CYP2C9 substrate - 0.5928 59.28%
CYP2D6 substrate - 0.8621 86.21%
CYP3A4 inhibition - 0.6052 60.52%
CYP2C9 inhibition - 0.9389 93.89%
CYP2C19 inhibition - 0.9278 92.78%
CYP2D6 inhibition - 0.9299 92.99%
CYP1A2 inhibition - 0.9345 93.45%
CYP2C8 inhibition + 0.6656 66.56%
CYP inhibitory promiscuity - 0.9881 98.81%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8500 85.00%
Carcinogenicity (trinary) Non-required 0.6390 63.90%
Eye corrosion - 0.9855 98.55%
Eye irritation - 0.8954 89.54%
Skin irritation - 0.7942 79.42%
Skin corrosion - 0.9352 93.52%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7024 70.24%
Micronuclear + 0.8000 80.00%
Hepatotoxicity - 0.5198 51.98%
skin sensitisation - 0.8685 86.85%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.4578 45.78%
Acute Oral Toxicity (c) III 0.7190 71.90%
Estrogen receptor binding + 0.5310 53.10%
Androgen receptor binding + 0.7392 73.92%
Thyroid receptor binding + 0.7016 70.16%
Glucocorticoid receptor binding + 0.7881 78.81%
Aromatase binding + 0.7899 78.99%
PPAR gamma + 0.7922 79.22%
Honey bee toxicity - 0.7729 77.29%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5765 57.65%
Fish aquatic toxicity + 0.6808 68.08%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.91% 98.95%
CHEMBL3837 P07711 Cathepsin L 99.62% 96.61%
CHEMBL220 P22303 Acetylcholinesterase 99.56% 94.45%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 98.08% 95.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 98.00% 99.17%
CHEMBL4801 P29466 Caspase-1 97.86% 96.85%
CHEMBL3359 P21462 Formyl peptide receptor 1 97.81% 93.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.64% 96.09%
CHEMBL236 P41143 Delta opioid receptor 97.62% 99.35%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 97.53% 96.47%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.05% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.67% 94.45%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 96.54% 96.11%
CHEMBL5103 Q969S8 Histone deacetylase 10 96.26% 90.08%
CHEMBL4588 P22894 Matrix metalloproteinase 8 96.11% 94.66%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 95.23% 97.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.17% 97.09%
CHEMBL3468 P55210 Caspase-7 94.85% 95.68%
CHEMBL3776 Q14790 Caspase-8 94.65% 97.06%
CHEMBL2208 P49137 MAP kinase-activated protein kinase 2 93.72% 95.20%
CHEMBL230 P35354 Cyclooxygenase-2 93.64% 89.63%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 93.33% 90.24%
CHEMBL2001 Q9H244 Purinergic receptor P2Y12 93.05% 96.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 92.93% 92.32%
CHEMBL1801 P00747 Plasminogen 92.81% 92.44%
CHEMBL299 P17252 Protein kinase C alpha 92.62% 98.03%
CHEMBL4227 P25090 Lipoxin A4 receptor 92.61% 100.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 92.53% 89.50%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 92.34% 98.33%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 92.11% 88.42%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 92.09% 92.08%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.95% 97.25%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 91.67% 90.71%
CHEMBL4018 P49146 Neuropeptide Y receptor type 2 91.61% 98.94%
CHEMBL2094135 Q96BI3 Gamma-secretase 91.58% 98.05%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 91.21% 95.50%
CHEMBL221 P23219 Cyclooxygenase-1 90.90% 90.17%
CHEMBL259 P32245 Melanocortin receptor 4 90.77% 95.38%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 90.32% 96.90%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 90.22% 93.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 89.36% 97.29%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 89.23% 95.71%
CHEMBL2514 O95665 Neurotensin receptor 2 88.54% 100.00%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 88.28% 91.81%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 87.35% 94.55%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 87.19% 97.64%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.40% 85.14%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.82% 97.14%
CHEMBL1944495 P28065 Proteasome subunit beta type-9 85.42% 97.50%
CHEMBL1781 P11387 DNA topoisomerase I 85.38% 97.00%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.22% 96.00%
CHEMBL4662 P28074 Proteasome Macropain subunit MB1 85.19% 93.85%
CHEMBL1075317 P61964 WD repeat-containing protein 5 85.00% 96.33%
CHEMBL3891 P07384 Calpain 1 84.62% 93.04%
CHEMBL1937 Q92769 Histone deacetylase 2 84.59% 94.75%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 84.31% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.04% 95.89%
CHEMBL340 P08684 Cytochrome P450 3A4 82.99% 91.19%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 82.88% 93.10%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.65% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 81.81% 92.50%
CHEMBL213 P08588 Beta-1 adrenergic receptor 81.56% 95.56%
CHEMBL1949 P62937 Cyclophilin A 81.54% 98.57%
CHEMBL2996 Q05655 Protein kinase C delta 81.22% 97.79%
CHEMBL4581 P52732 Kinesin-like protein 1 81.02% 93.18%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 80.69% 94.80%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.50% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 145720590
LOTUS LTS0203708
wikiData Q104198019