Withalongolide K

Details

Top
Internal ID 4d716cc8-3538-4a61-953d-6669de4180e8
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2R)-2-[(1S)-1-[(6S,8S,9S,13S,14S,17R)-1,6-dihydroxy-13-methyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-17-yl]ethyl]-5-methyl-4-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]-2,3-dihydropyran-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C33H46O10/c1-15-17(14-41-32-30(39)29(38)28(37)26(13-34)43-32)11-25(42-31(15)40)16(2)21-7-8-22-20-12-24(36)19-5-4-6-23(35)27(19)18(20)9-10-33(21,22)3/h4-6,16,18,20-22,24-26,28-30,32,34-39H,7-14H2,1-3H3/t16-,18-,20+,21+,22-,24-,25+,26+,28+,29-,30+,32+,33+/m0/s1
InChI Key QYYMGJGFQVRKJA-RMHZGSCISA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C33H46O10
Molecular Weight 602.70 g/mol
Exact Mass 602.30909766 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.44
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

Top
CHEBI:69115
Withalongolidesaponin
CHEMBL1934463
DTXSID801106677
Q27137456
28-O-beta-D-glucopyranosyl-1,6alpha-dihydroxy-19-norwitha-1,3,5(10),24-tetraenolide
[(2R)-2-{(1S)-1-[(6alpha,17beta)-1,6-dihydroxyestra-1,3,5(10)-trien-17-yl]ethyl}-5-methyl-6-oxo-3,6-dihydro-2H-pyran-4-yl]methyl beta-D-glucopyranoside
1350448-52-0
19-Norergosta-1,3,5(10),24-tetraen-26-oic acid, 28-(beta-D-glucopyranosyloxy)-1,6,22-trihydroxy-, delta-lactone, (6alpha,22R)-

2D Structure

Top
2D Structure of Withalongolide K

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8620 86.20%
Caco-2 - 0.8616 86.16%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7607 76.07%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8144 81.44%
OATP1B3 inhibitior + 0.8443 84.43%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7776 77.76%
BSEP inhibitior + 0.7468 74.68%
P-glycoprotein inhibitior + 0.6124 61.24%
P-glycoprotein substrate + 0.5754 57.54%
CYP3A4 substrate + 0.7588 75.88%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8721 87.21%
CYP3A4 inhibition - 0.9223 92.23%
CYP2C9 inhibition - 0.8871 88.71%
CYP2C19 inhibition - 0.8511 85.11%
CYP2D6 inhibition - 0.9168 91.68%
CYP1A2 inhibition - 0.7460 74.60%
CYP2C8 inhibition + 0.7935 79.35%
CYP inhibitory promiscuity - 0.9117 91.17%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6575 65.75%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9397 93.97%
Skin irritation - 0.6358 63.58%
Skin corrosion - 0.9504 95.04%
Ames mutagenesis - 0.6608 66.08%
Human Ether-a-go-go-Related Gene inhibition + 0.7847 78.47%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.6959 69.59%
skin sensitisation - 0.9011 90.11%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6201 62.01%
Acute Oral Toxicity (c) I 0.5100 51.00%
Estrogen receptor binding + 0.8110 81.10%
Androgen receptor binding + 0.7692 76.92%
Thyroid receptor binding - 0.5393 53.93%
Glucocorticoid receptor binding + 0.6841 68.41%
Aromatase binding + 0.5580 55.80%
PPAR gamma + 0.6181 61.81%
Honey bee toxicity - 0.7017 70.17%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9814 98.14%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.49% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.97% 97.09%
CHEMBL2581 P07339 Cathepsin D 96.89% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.61% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.42% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.12% 95.56%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.61% 93.56%
CHEMBL220 P22303 Acetylcholinesterase 92.20% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 92.16% 96.38%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.53% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 89.51% 94.75%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.09% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.19% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.14% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.80% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 87.66% 99.15%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.02% 95.89%
CHEMBL226 P30542 Adenosine A1 receptor 85.90% 95.93%
CHEMBL5103 Q969S8 Histone deacetylase 10 84.36% 90.08%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.05% 94.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.65% 95.83%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 83.13% 100.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.72% 97.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.24% 97.25%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.09% 97.36%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.73% 90.71%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Physalis longifolia

Cross-Links

Top
PubChem 56926207
LOTUS LTS0168753
wikiData Q27137456