Withalongolide B

Details

Top
Internal ID d458b8c4-eceb-4e7f-aa50-5f06d6614b37
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name (1S,2S,6S,7R,9R,11S,12S,15R,16S)-15-[(1S)-1-[(2R)-4,5-dimethyl-6-oxo-2,3-dihydropyran-2-yl]ethyl]-6-hydroxy-2-(hydroxymethyl)-16-methyl-8-oxapentacyclo[9.7.0.02,7.07,9.012,16]octadec-4-en-3-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2CCC3C2(CCC4C3CC5C6(C4(C(=O)C=CC6O)CO)O5)C)C
SMILES (Isomeric) CC1=C(C(=O)O[C@H](C1)[C@@H](C)[C@H]2CC[C@@H]3[C@@]2(CC[C@H]4[C@H]3C[C@@H]5[C@]6([C@@]4(C(=O)C=C[C@@H]6O)CO)O5)C)C
InChI InChI=1S/C28H38O6/c1-14-11-21(33-25(32)15(14)2)16(3)18-5-6-19-17-12-24-28(34-24)23(31)8-7-22(30)27(28,13-29)20(17)9-10-26(18,19)4/h7-8,16-21,23-24,29,31H,5-6,9-13H2,1-4H3/t16-,17-,18+,19-,20-,21+,23-,24+,26+,27-,28+/m0/s1
InChI Key OZBFGYQTKGOIKC-NSYRIIBJSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C28H38O6
Molecular Weight 470.60 g/mol
Exact Mass 470.26683893 g/mol
Topological Polar Surface Area (TPSA) 96.40 Ų
XlogP 3.90
Atomic LogP (AlogP) 3.35
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

Top
CHEBI:69107
CHEMBL1934452
SCHEMBL11950398
DTXSID201118014
1350448-43-9
Q27137448
(4beta,5beta,6beta,22R)-4,19-dihydroxy-5,6:22,26-diepoxyergosta-2,24-diene-1,26-dione
Ergosta-2,24-dien-26-oic acid, 5,6-epoxy-4,19,22-trihydroxy-1-oxo-, I -lactone, (4I(2),5I(2),6I(2),22R)-

2D Structure

Top
2D Structure of Withalongolide B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8983 89.83%
Caco-2 - 0.6804 68.04%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.7714 77.14%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8456 84.56%
OATP1B3 inhibitior + 0.9702 97.02%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5771 57.71%
BSEP inhibitior + 0.9217 92.17%
P-glycoprotein inhibitior + 0.5721 57.21%
P-glycoprotein substrate + 0.5592 55.92%
CYP3A4 substrate + 0.7394 73.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8921 89.21%
CYP3A4 inhibition - 0.8547 85.47%
CYP2C9 inhibition - 0.8867 88.67%
CYP2C19 inhibition - 0.9390 93.90%
CYP2D6 inhibition - 0.9517 95.17%
CYP1A2 inhibition - 0.7829 78.29%
CYP2C8 inhibition + 0.5287 52.87%
CYP inhibitory promiscuity - 0.9338 93.38%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5377 53.77%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9730 97.30%
Skin irritation + 0.5455 54.55%
Skin corrosion - 0.9323 93.23%
Ames mutagenesis - 0.5648 56.48%
Human Ether-a-go-go-Related Gene inhibition - 0.3685 36.85%
Micronuclear - 0.7100 71.00%
Hepatotoxicity + 0.5217 52.17%
skin sensitisation - 0.8846 88.46%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.4888 48.88%
Acute Oral Toxicity (c) I 0.5780 57.80%
Estrogen receptor binding + 0.8273 82.73%
Androgen receptor binding + 0.7940 79.40%
Thyroid receptor binding + 0.5367 53.67%
Glucocorticoid receptor binding + 0.7630 76.30%
Aromatase binding + 0.7313 73.13%
PPAR gamma + 0.5745 57.45%
Honey bee toxicity - 0.7444 74.44%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9671 96.71%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.18% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.00% 95.56%
CHEMBL2581 P07339 Cathepsin D 91.98% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.97% 97.09%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 88.56% 97.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.20% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.28% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.02% 86.33%
CHEMBL221 P23219 Cyclooxygenase-1 86.72% 90.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.64% 100.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 84.59% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.76% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.67% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.67% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 81.37% 94.73%
CHEMBL5028 O14672 ADAM10 80.82% 97.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.17% 94.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Physalis longifolia

Cross-Links

Top
PubChem 56649344
NPASS NPC50774
ChEMBL CHEMBL1934452
LOTUS LTS0127699
wikiData Q27137448