Wakodecaline B

Details

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Internal ID 2da2607b-bdfa-4e8b-b8fe-b0daffec2400
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (2R)-2-[[(2S,3R,3aS,5aR,7S,9aS,9bR)-4,7,9b-trimethyl-1-oxo-3-[(E)-3-oxobut-1-enyl]-3,3a,5a,6,7,8,9,9a-octahydro-2H-cyclopenta[a]naphthalene-2-carbonyl]-methylamino]-3-hydroxypropanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H35NO6/c1-13-6-9-18-16(10-13)11-14(2)21-17(8-7-15(3)28)20(22(29)25(18,21)4)23(30)26(5)19(12-27)24(31)32/h7-8,11,13,16-21,27H,6,9-10,12H2,1-5H3,(H,31,32)/b8-7+/t13-,16+,17-,18-,19+,20-,21+,25+/m0/s1
InChI Key ARANVBSJVTTXRP-KGMUJOTPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H35NO6
Molecular Weight 445.50 g/mol
Exact Mass 445.24643784 g/mol
Topological Polar Surface Area (TPSA) 112.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 2.49
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Wakodecaline B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9461 94.61%
Caco-2 - 0.6293 62.93%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7075 70.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8561 85.61%
OATP1B3 inhibitior + 0.9177 91.77%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7602 76.02%
BSEP inhibitior + 0.6120 61.20%
P-glycoprotein inhibitior - 0.4469 44.69%
P-glycoprotein substrate + 0.5338 53.38%
CYP3A4 substrate + 0.7077 70.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8998 89.98%
CYP3A4 inhibition - 0.8899 88.99%
CYP2C9 inhibition - 0.7749 77.49%
CYP2C19 inhibition - 0.8252 82.52%
CYP2D6 inhibition - 0.8945 89.45%
CYP1A2 inhibition - 0.8013 80.13%
CYP2C8 inhibition - 0.6268 62.68%
CYP inhibitory promiscuity - 0.7023 70.23%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5847 58.47%
Eye corrosion - 0.9877 98.77%
Eye irritation - 0.9674 96.74%
Skin irritation - 0.7389 73.89%
Skin corrosion - 0.9339 93.39%
Ames mutagenesis - 0.5307 53.07%
Human Ether-a-go-go-Related Gene inhibition - 0.6306 63.06%
Micronuclear + 0.6500 65.00%
Hepatotoxicity - 0.6342 63.42%
skin sensitisation - 0.8648 86.48%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.7769 77.69%
Acute Oral Toxicity (c) III 0.6329 63.29%
Estrogen receptor binding + 0.6490 64.90%
Androgen receptor binding + 0.6568 65.68%
Thyroid receptor binding - 0.6016 60.16%
Glucocorticoid receptor binding + 0.6925 69.25%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.6329 63.29%
Honey bee toxicity - 0.7283 72.83%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.6053 60.53%
Fish aquatic toxicity + 0.9652 96.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.26% 96.09%
CHEMBL2581 P07339 Cathepsin D 91.40% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.16% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.05% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.22% 86.33%
CHEMBL340 P08684 Cytochrome P450 3A4 85.56% 91.19%
CHEMBL221 P23219 Cyclooxygenase-1 83.22% 90.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.96% 97.09%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.85% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.52% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139589498
LOTUS LTS0183479
wikiData Q104917205