Vitedoin B

Details

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Internal ID 01e043e5-07a5-4b25-a7f0-10e495ebfd75
Taxonomy Organoheterocyclic compounds > Lactones > Gamma butyrolactones
IUPAC Name [(2S,4aS,5R,6R,8aS)-1,1,4a,6-tetramethyl-5'-oxospiro[3,4,6,7,8,8a-hexahydro-2H-naphthalene-5,2'-oxolane]-2-yl] acetate
SMILES (Canonical) CC1CCC2C(C(CCC2(C13CCC(=O)O3)C)OC(=O)C)(C)C
SMILES (Isomeric) C[C@@H]1CC[C@@H]2[C@@]([C@@]13CCC(=O)O3)(CC[C@@H](C2(C)C)OC(=O)C)C
InChI InChI=1S/C19H30O4/c1-12-6-7-14-17(3,4)15(22-13(2)20)8-10-18(14,5)19(12)11-9-16(21)23-19/h12,14-15H,6-11H2,1-5H3/t12-,14+,15+,18+,19-/m1/s1
InChI Key HBMMUGYRQKNIBQ-SZQWKIALSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C19H30O4
Molecular Weight 322.40 g/mol
Exact Mass 322.21440943 g/mol
Topological Polar Surface Area (TPSA) 52.60 Ų
XlogP 4.10
Atomic LogP (AlogP) 3.87
H-Bond Acceptor 4
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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CHEMBL505801
[(2S,4aS,5R,6R,8aS)-1,1,4a,6-tetramethyl-5'-oxospiro[3,4,6,7,8,8a-hexahydro-2H-naphthalene-5,2'-oxolane]-2-yl] acetate

2D Structure

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2D Structure of Vitedoin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9893 98.93%
Caco-2 + 0.7357 73.57%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.7571 75.71%
OATP2B1 inhibitior - 0.8603 86.03%
OATP1B1 inhibitior + 0.8170 81.70%
OATP1B3 inhibitior + 0.9618 96.18%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior - 0.6644 66.44%
P-glycoprotein inhibitior - 0.5354 53.54%
P-glycoprotein substrate - 0.8927 89.27%
CYP3A4 substrate + 0.6449 64.49%
CYP2C9 substrate - 0.7947 79.47%
CYP2D6 substrate - 0.8487 84.87%
CYP3A4 inhibition - 0.7592 75.92%
CYP2C9 inhibition - 0.7950 79.50%
CYP2C19 inhibition - 0.6984 69.84%
CYP2D6 inhibition - 0.9584 95.84%
CYP1A2 inhibition - 0.9175 91.75%
CYP2C8 inhibition - 0.6386 63.86%
CYP inhibitory promiscuity - 0.9412 94.12%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6784 67.84%
Eye corrosion - 0.9822 98.22%
Eye irritation - 0.8751 87.51%
Skin irritation - 0.5879 58.79%
Skin corrosion - 0.8217 82.17%
Ames mutagenesis - 0.7800 78.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5000 50.00%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.8092 80.92%
Respiratory toxicity - 0.6667 66.67%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.5621 56.21%
Acute Oral Toxicity (c) III 0.6987 69.87%
Estrogen receptor binding + 0.8181 81.81%
Androgen receptor binding + 0.5884 58.84%
Thyroid receptor binding + 0.6513 65.13%
Glucocorticoid receptor binding + 0.7002 70.02%
Aromatase binding + 0.5247 52.47%
PPAR gamma + 0.6985 69.85%
Honey bee toxicity - 0.8016 80.16%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity + 0.9924 99.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.13% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.89% 96.09%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 92.57% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.35% 94.45%
CHEMBL2581 P07339 Cathepsin D 88.04% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.62% 95.56%
CHEMBL340 P08684 Cytochrome P450 3A4 86.13% 91.19%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.74% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.24% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.12% 89.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.11% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.81% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vitex negundo
Vitex trifolia subsp. litoralis

Cross-Links

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PubChem 11771639
NPASS NPC55508
LOTUS LTS0192136
wikiData Q105025374