Vitamin D2 (6,19,19-d3)

Details

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Internal ID 5dcaa614-928e-480f-b006-402bba094af1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Vitamin D and derivatives
IUPAC Name (1S,3Z)-3-[(2E)-2-[(1R,3aS,7aR)-1-[(E,2R,5R)-5,6-dimethylhept-3-en-2-yl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]-1-deuterioethylidene]-4-(dideuteriomethylidene)cyclohexan-1-ol
SMILES (Canonical) CC(C)C(C)C=CC(C)C1CCC2C1(CCCC2=CC=C3CC(CCC3=C)O)C
SMILES (Isomeric) [2H]C(=C\1CC[C@@H](C/C1=C(\[2H])/C=C/2\CCC[C@]3([C@H]2CC[C@@H]3[C@H](C)/C=C/[C@H](C)C(C)C)C)O)[2H]
InChI InChI=1S/C28H44O/c1-19(2)20(3)9-10-22(5)26-15-16-27-23(8-7-17-28(26,27)6)12-13-24-18-25(29)14-11-21(24)4/h9-10,12-13,19-20,22,25-27,29H,4,7-8,11,14-18H2,1-3,5-6H3/b10-9+,23-12+,24-13-/t20-,22+,25-,26+,27-,28+/m0/s1/i4D2,13D
InChI Key MECHNRXZTMCUDQ-OQGZBSKRSA-N
Popularity 12 references in papers

Physical and Chemical Properties

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Molecular Formula C28H44O
Molecular Weight 399.70 g/mol
Exact Mass 399.358046261 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 7.40
Atomic LogP (AlogP) 7.64
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 5

Synonyms

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1217448-46-8
VITAMIN D2
Vitamin D2 (6,19,19-d3)
Davitin
Metadee
Mykostin
Radiostol
Decaps
Infron
Shock-ferol
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Vitamin D2 (6,19,19-d3)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 - 0.5535 55.35%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Lysosomes 0.5091 50.91%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7820 78.20%
OATP1B3 inhibitior - 0.3549 35.49%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8415 84.15%
P-glycoprotein inhibitior + 0.6796 67.96%
P-glycoprotein substrate - 0.6371 63.71%
CYP3A4 substrate + 0.6269 62.69%
CYP2C9 substrate - 0.8255 82.55%
CYP2D6 substrate - 0.7567 75.67%
CYP3A4 inhibition - 0.7881 78.81%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9551 95.51%
CYP1A2 inhibition - 0.9256 92.56%
CYP2C8 inhibition - 0.5811 58.11%
CYP inhibitory promiscuity - 0.7093 70.93%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6318 63.18%
Eye corrosion - 0.9868 98.68%
Eye irritation - 0.9716 97.16%
Skin irritation + 0.5585 55.85%
Skin corrosion - 0.9480 94.80%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7730 77.30%
Micronuclear - 0.9600 96.00%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation + 0.6904 69.04%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.7847 78.47%
Acute Oral Toxicity (c) I 0.8559 85.59%
Estrogen receptor binding + 0.8903 89.03%
Androgen receptor binding + 0.7671 76.71%
Thyroid receptor binding + 0.7284 72.84%
Glucocorticoid receptor binding + 0.6682 66.82%
Aromatase binding + 0.6005 60.05%
PPAR gamma + 0.6936 69.36%
Honey bee toxicity - 0.7957 79.57%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9932 99.32%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1871 P10275 Androgen Receptor 1.1 nM
Ki
via Super-PRED
CHEMBL1293235 P02545 Prelamin-A/C 31.6 nM
100 nM
Potency
Potency
via Super-PRED
via Super-PRED

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1977 P11473 Vitamin D receptor 99.33% 99.43%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.73% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.06% 98.95%
CHEMBL226 P30542 Adenosine A1 receptor 94.24% 95.93%
CHEMBL221 P23219 Cyclooxygenase-1 92.81% 90.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.24% 97.25%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.89% 93.56%
CHEMBL237 P41145 Kappa opioid receptor 90.65% 98.10%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.45% 82.69%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.22% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.30% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.24% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.18% 97.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 86.86% 90.71%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.40% 94.45%
CHEMBL5203 P33316 dUTP pyrophosphatase 85.93% 99.18%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.52% 91.07%
CHEMBL5600 P27448 Serine/threonine-protein kinase c-TAK1 83.18% 88.81%
CHEMBL4072 P07858 Cathepsin B 83.08% 93.67%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.80% 100.00%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 80.64% 95.00%
CHEMBL1902 P62942 FK506-binding protein 1A 80.15% 97.05%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Humulus lupulus

Cross-Links

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PubChem 66577029
NPASS NPC78738