Virgibiodine

Details

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Internal ID 7c19782b-d539-48a1-941a-3d1c760fdd0a
Taxonomy Organoheterocyclic compounds > Quinolizidines
IUPAC Name 11-but-3-enyl-2,11-diazatricyclo[7.3.1.02,7]tridecan-8-one
SMILES (Canonical) C=CCCN1CC2CC(C1)N3CCCCC3C2=O
SMILES (Isomeric) C=CCCN1CC2CC(C1)N3CCCCC3C2=O
InChI InChI=1S/C15H24N2O/c1-2-3-7-16-10-12-9-13(11-16)17-8-5-4-6-14(17)15(12)18/h2,12-14H,1,3-11H2
InChI Key OORYDXODZFCOKG-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C15H24N2O
Molecular Weight 248.36 g/mol
Exact Mass 248.188863393 g/mol
Topological Polar Surface Area (TPSA) 23.60 Ų
XlogP 2.10
Atomic LogP (AlogP) 1.69
H-Bond Acceptor 3
H-Bond Donor 0
Rotatable Bonds 3

Synonyms

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NSC366470
NSC-366470

2D Structure

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2D Structure of Virgibiodine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9760 97.60%
Caco-2 + 0.6989 69.89%
Blood Brain Barrier + 0.9612 96.12%
Human oral bioavailability + 0.6286 62.86%
Subcellular localzation Mitochondria 0.7193 71.93%
OATP2B1 inhibitior - 0.8520 85.20%
OATP1B1 inhibitior + 0.9359 93.59%
OATP1B3 inhibitior + 0.9472 94.72%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior + 0.7250 72.50%
BSEP inhibitior - 0.4549 45.49%
P-glycoprotein inhibitior - 0.9312 93.12%
P-glycoprotein substrate - 0.6972 69.72%
CYP3A4 substrate + 0.5781 57.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.5347 53.47%
CYP3A4 inhibition - 0.8830 88.30%
CYP2C9 inhibition - 0.8502 85.02%
CYP2C19 inhibition - 0.8150 81.50%
CYP2D6 inhibition - 0.7513 75.13%
CYP1A2 inhibition - 0.5811 58.11%
CYP2C8 inhibition - 0.9535 95.35%
CYP inhibitory promiscuity - 0.6209 62.09%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5936 59.36%
Eye corrosion - 0.9487 94.87%
Eye irritation - 0.5834 58.34%
Skin irritation - 0.5963 59.63%
Skin corrosion - 0.8139 81.39%
Ames mutagenesis - 0.7500 75.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3854 38.54%
Micronuclear + 0.5100 51.00%
Hepatotoxicity - 0.5055 50.55%
skin sensitisation - 0.8437 84.37%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity + 0.5712 57.12%
Acute Oral Toxicity (c) III 0.5789 57.89%
Estrogen receptor binding - 0.8627 86.27%
Androgen receptor binding - 0.6805 68.05%
Thyroid receptor binding - 0.7529 75.29%
Glucocorticoid receptor binding - 0.7155 71.55%
Aromatase binding - 0.8448 84.48%
PPAR gamma - 0.7399 73.99%
Honey bee toxicity - 0.7868 78.68%
Biodegradation - 0.5500 55.00%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity - 0.7543 75.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL240 Q12809 HERG 97.59% 89.76%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 95.01% 93.40%
CHEMBL2581 P07339 Cathepsin D 94.23% 98.95%
CHEMBL1978 P11511 Cytochrome P450 19A1 93.57% 91.76%
CHEMBL1902 P62942 FK506-binding protein 1A 93.26% 97.05%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 92.05% 82.69%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.70% 95.56%
CHEMBL238 Q01959 Dopamine transporter 89.29% 95.88%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 88.09% 93.04%
CHEMBL2073 P07947 Tyrosine-protein kinase YES 87.88% 83.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.26% 97.25%
CHEMBL217 P14416 Dopamine D2 receptor 87.19% 95.62%
CHEMBL2730 P21980 Protein-glutamine gamma-glutamyltransferase 86.82% 92.38%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 86.48% 93.00%
CHEMBL3023 Q9NRA0 Sphingosine kinase 2 86.05% 95.61%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.34% 95.89%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.12% 90.08%
CHEMBL228 P31645 Serotonin transporter 85.08% 95.51%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 84.81% 98.33%
CHEMBL5203 P33316 dUTP pyrophosphatase 84.19% 99.18%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 84.04% 94.78%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.96% 97.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.79% 95.50%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.60% 96.09%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.47% 90.71%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 83.36% 90.24%
CHEMBL4588 P22894 Matrix metalloproteinase 8 82.83% 94.66%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.44% 100.00%
CHEMBL5805 Q9NR97 Toll-like receptor 8 82.42% 96.25%
CHEMBL4803 P29474 Nitric-oxide synthase, endothelial 82.14% 86.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.89% 93.03%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.86% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Genista monspessulana

Cross-Links

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PubChem 435265
LOTUS LTS0116338
wikiData Q105195566