Virgatolide C

Details

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Internal ID 35b11fc8-dc8e-42b8-b34c-f114bedc501e
Taxonomy Organoheterocyclic compounds > Benzofurans > Benzofuranones
IUPAC Name (2R,3S,4'R,6'S,8R)-4',5-dihydroxy-8-[(1S)-1-hydroxyethyl]-3,6'-dimethylspiro[4,8-dihydro-3H-furo[3,4-g]chromene-2,2'-oxane]-6-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H24O7/c1-8-4-12-14(26-19(8)7-11(21)5-9(2)25-19)6-13-15(16(12)22)18(23)24-17(13)10(3)20/h6,8-11,17,20-22H,4-5,7H2,1-3H3/t8-,9-,10-,11+,17-,19+/m0/s1
InChI Key FZIVPEMPRYZJDQ-WYPMTINJSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C19H24O7
Molecular Weight 364.40 g/mol
Exact Mass 364.15220310 g/mol
Topological Polar Surface Area (TPSA) 105.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 1.81
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Virgatolide C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9817 98.17%
Caco-2 - 0.5878 58.78%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7231 72.31%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8669 86.69%
OATP1B3 inhibitior + 0.7908 79.08%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.7717 77.17%
P-glycoprotein inhibitior - 0.7825 78.25%
P-glycoprotein substrate + 0.5332 53.32%
CYP3A4 substrate + 0.6490 64.90%
CYP2C9 substrate + 0.6365 63.65%
CYP2D6 substrate - 0.8465 84.65%
CYP3A4 inhibition - 0.8096 80.96%
CYP2C9 inhibition - 0.9208 92.08%
CYP2C19 inhibition - 0.8885 88.85%
CYP2D6 inhibition - 0.9212 92.12%
CYP1A2 inhibition - 0.5284 52.84%
CYP2C8 inhibition - 0.6875 68.75%
CYP inhibitory promiscuity - 0.9610 96.10%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5418 54.18%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9268 92.68%
Skin irritation - 0.6874 68.74%
Skin corrosion - 0.9393 93.93%
Ames mutagenesis - 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7324 73.24%
Micronuclear - 0.6641 66.41%
Hepatotoxicity + 0.5533 55.33%
skin sensitisation - 0.8195 81.95%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.8151 81.51%
Acute Oral Toxicity (c) III 0.4300 43.00%
Estrogen receptor binding + 0.7009 70.09%
Androgen receptor binding + 0.6618 66.18%
Thyroid receptor binding + 0.5847 58.47%
Glucocorticoid receptor binding + 0.8719 87.19%
Aromatase binding + 0.7308 73.08%
PPAR gamma + 0.7805 78.05%
Honey bee toxicity - 0.6951 69.51%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6200 62.00%
Fish aquatic toxicity + 0.9771 97.71%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.34% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.92% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.91% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.33% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.90% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.78% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.58% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.99% 95.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 89.92% 90.71%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.14% 97.25%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.00% 93.56%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 85.08% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.86% 95.89%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.70% 99.23%
CHEMBL1951 P21397 Monoamine oxidase A 83.95% 91.49%
CHEMBL4208 P20618 Proteasome component C5 82.25% 90.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.66% 91.07%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.99% 93.40%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.69% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum atomarium

Cross-Links

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PubChem 53307010
LOTUS LTS0038922
wikiData Q105284716