Vignatic acid A

Details

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Internal ID 508b33e1-4261-4e79-b074-923360af2e6a
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name 7-benzyl-4-[(2-hydroxy-4-methylpentanoyl)amino]-5,8-dioxo-3-propan-2-yl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-triene-10-carboxylic acid
SMILES (Canonical) CC(C)CC(C(=O)NC1C(OC2=CC=C(CC(NC(=O)C(NC1=O)CC3=CC=CC=C3)C(=O)O)C=C2)C(C)C)O
SMILES (Isomeric) CC(C)CC(C(=O)NC1C(OC2=CC=C(CC(NC(=O)C(NC1=O)CC3=CC=CC=C3)C(=O)O)C=C2)C(C)C)O
InChI InChI=1S/C30H39N3O7/c1-17(2)14-24(34)28(36)33-25-26(18(3)4)40-21-12-10-20(11-13-21)16-23(30(38)39)32-27(35)22(31-29(25)37)15-19-8-6-5-7-9-19/h5-13,17-18,22-26,34H,14-16H2,1-4H3,(H,31,37)(H,32,35)(H,33,36)(H,38,39)
InChI Key OEJLUFSEWIDXDN-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C30H39N3O7
Molecular Weight 553.60 g/mol
Exact Mass 553.27880059 g/mol
Topological Polar Surface Area (TPSA) 154.00 Ų
XlogP 4.10
Atomic LogP (AlogP) 1.83
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 8

Synonyms

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CHEBI:170134
7-benzyl-4-[(2-hydroxy-4-methylpentanoyl)amino]-5,8-dioxo-3-propan-2-yl-2-oxa-6,9-diazabicyclo[10.2.2]hexadeca-1(14),12,15-triene-10-carboxylic acid

2D Structure

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2D Structure of Vignatic acid A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8628 86.28%
Caco-2 - 0.8470 84.70%
Blood Brain Barrier - 0.9500 95.00%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Nucleus 0.3926 39.26%
OATP2B1 inhibitior - 0.5727 57.27%
OATP1B1 inhibitior + 0.9016 90.16%
OATP1B3 inhibitior + 0.9157 91.57%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9568 95.68%
BSEP inhibitior + 0.8979 89.79%
P-glycoprotein inhibitior + 0.6647 66.47%
P-glycoprotein substrate + 0.8238 82.38%
CYP3A4 substrate + 0.6435 64.35%
CYP2C9 substrate - 0.6054 60.54%
CYP2D6 substrate - 0.8276 82.76%
CYP3A4 inhibition - 0.8570 85.70%
CYP2C9 inhibition - 0.8967 89.67%
CYP2C19 inhibition - 0.8880 88.80%
CYP2D6 inhibition - 0.9191 91.91%
CYP1A2 inhibition - 0.9015 90.15%
CYP2C8 inhibition - 0.6020 60.20%
CYP inhibitory promiscuity - 0.9186 91.86%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8500 85.00%
Carcinogenicity (trinary) Non-required 0.5830 58.30%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.9505 95.05%
Skin irritation - 0.8156 81.56%
Skin corrosion - 0.9514 95.14%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6857 68.57%
Micronuclear + 0.8100 81.00%
Hepatotoxicity - 0.5343 53.43%
skin sensitisation - 0.8860 88.60%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.6007 60.07%
Acute Oral Toxicity (c) III 0.6250 62.50%
Estrogen receptor binding + 0.7468 74.68%
Androgen receptor binding + 0.6921 69.21%
Thyroid receptor binding + 0.5446 54.46%
Glucocorticoid receptor binding + 0.7389 73.89%
Aromatase binding + 0.5472 54.72%
PPAR gamma + 0.7284 72.84%
Honey bee toxicity - 0.7850 78.50%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.8487 84.87%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.21% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.10% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.61% 85.14%
CHEMBL221 P23219 Cyclooxygenase-1 96.75% 90.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.51% 91.11%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 94.37% 97.64%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.96% 95.56%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 90.01% 95.50%
CHEMBL2179 P04062 Beta-glucocerebrosidase 88.51% 85.31%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.51% 99.17%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 87.27% 83.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.97% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.62% 97.14%
CHEMBL3837 P07711 Cathepsin L 85.33% 96.61%
CHEMBL268 P43235 Cathepsin K 85.13% 96.85%
CHEMBL2535 P11166 Glucose transporter 82.58% 98.75%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.40% 93.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.89% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 81.89% 96.47%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.74% 97.25%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.70% 99.23%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.45% 89.50%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 81.03% 90.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.11% 97.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vigna radiata

Cross-Links

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PubChem 85210698
LOTUS LTS0116742
wikiData Q105190322