Vibralactone D

Details

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Internal ID f47d7c09-7b10-4419-9dbe-7b5b7070f6a1
Taxonomy Organoheterocyclic compounds > Lactones
IUPAC Name (1R,5S,7S)-7-hydroxy-1-(3-methylbut-2-enyl)-3-oxabicyclo[3.2.1]octan-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C12H18O3/c1-8(2)3-4-12-6-9(5-10(12)13)7-15-11(12)14/h3,9-10,13H,4-7H2,1-2H3/t9-,10+,12-/m1/s1
InChI Key SUNCJWCQYMBYLA-JFGNBEQYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C12H18O3
Molecular Weight 210.27 g/mol
Exact Mass 210.125594432 g/mol
Topological Polar Surface Area (TPSA) 46.50 Ų
XlogP 1.80
Atomic LogP (AlogP) 1.66
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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1251748-32-9
(1R,5S,7S)-7-hydroxy-1-(3-methylbut-2-enyl)-3-oxabicyclo[3.2.1]octan-2-one
HY-N8523
AKOS040762487
CS-0145581
(1S,5R,6S)-6-hydroxy-5-(3-methylbut-2-enyl)-3-oxabicyclo[3.2.1]octan-4-one

2D Structure

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2D Structure of Vibralactone D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9856 98.56%
Caco-2 + 0.6575 65.75%
Blood Brain Barrier - 0.5322 53.22%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7940 79.40%
OATP2B1 inhibitior - 0.8531 85.31%
OATP1B1 inhibitior + 0.9346 93.46%
OATP1B3 inhibitior + 0.9662 96.62%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9254 92.54%
P-glycoprotein inhibitior - 0.9741 97.41%
P-glycoprotein substrate - 0.8387 83.87%
CYP3A4 substrate - 0.5081 50.81%
CYP2C9 substrate - 0.8111 81.11%
CYP2D6 substrate - 0.8206 82.06%
CYP3A4 inhibition - 0.9677 96.77%
CYP2C9 inhibition - 0.8808 88.08%
CYP2C19 inhibition - 0.7352 73.52%
CYP2D6 inhibition - 0.9330 93.30%
CYP1A2 inhibition - 0.8663 86.63%
CYP2C8 inhibition - 0.9444 94.44%
CYP inhibitory promiscuity - 0.9389 93.89%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9613 96.13%
Carcinogenicity (trinary) Non-required 0.6563 65.63%
Eye corrosion - 0.9785 97.85%
Eye irritation + 0.8452 84.52%
Skin irritation - 0.6599 65.99%
Skin corrosion - 0.9312 93.12%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7360 73.60%
Micronuclear - 0.7326 73.26%
Hepatotoxicity + 0.6230 62.30%
skin sensitisation - 0.6941 69.41%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.6250 62.50%
Nephrotoxicity + 0.7463 74.63%
Acute Oral Toxicity (c) III 0.4081 40.81%
Estrogen receptor binding - 0.6238 62.38%
Androgen receptor binding - 0.7224 72.24%
Thyroid receptor binding - 0.6160 61.60%
Glucocorticoid receptor binding - 0.5753 57.53%
Aromatase binding - 0.7798 77.98%
PPAR gamma - 0.7433 74.33%
Honey bee toxicity - 0.8480 84.80%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9361 93.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.35% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.59% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.59% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.30% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.14% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.90% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.74% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.10% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 45101959
LOTUS LTS0185550
wikiData Q105261138