Urobilin

Details

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Internal ID 49a0c26b-80f5-459a-8248-d9f466c297a0
Taxonomy Organoheterocyclic compounds > Tetrapyrroles and derivatives > Bilirubins
IUPAC Name 3-[(2Z)-2-[[3-(2-carboxyethyl)-5-[[(2S)-3-ethyl-4-methyl-5-oxo-1,2-dihydropyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-2-yl]methylidene]-5-[[(2S)-4-ethyl-3-methyl-5-oxo-1,2-dihydropyrrol-2-yl]methyl]-4-methylpyrrol-3-yl]propanoic acid
SMILES (Canonical) CCC1=C(C(=O)NC1CC2=C(C(=C(N2)C=C3C(=C(C(=N3)CC4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
SMILES (Isomeric) CCC1=C(C(=O)N[C@H]1CC2=C(C(=C(N2)/C=C\3/C(=C(C(=N3)C[C@H]4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
InChI InChI=1S/C33H42N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h15,26-27,35H,7-14H2,1-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b28-15-/t26-,27-/m0/s1
InChI Key KDCCOOGTVSRCHX-UYMYUHGCSA-N
Popularity 248 references in papers

Physical and Chemical Properties

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Molecular Formula C33H42N4O6
Molecular Weight 590.70 g/mol
Exact Mass 590.31043507 g/mol
Topological Polar Surface Area (TPSA) 161.00 Ų
XlogP 1.60
Atomic LogP (AlogP) 4.70
H-Bond Acceptor 5
H-Bond Donor 5
Rotatable Bonds 13

Synonyms

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(-)-Urobilin
1856-98-0
3,18-Diethyl-1,4,5,15,16,19,22,24-octahydro-2,7,13,17-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropionic acid
UNII-G0OTH73Y0M
EINECS 217-456-3
UROBILIN [MI]
UROBILIN IX.ALPHA.
UROBILIN (*)
UROBILIN, (-)-
SCHEMBL473220
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Urobilin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9122 91.22%
Caco-2 - 0.8438 84.38%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.8010 80.10%
OATP2B1 inhibitior - 0.7134 71.34%
OATP1B1 inhibitior + 0.8106 81.06%
OATP1B3 inhibitior - 0.2459 24.59%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.7822 78.22%
BSEP inhibitior + 0.8810 88.10%
P-glycoprotein inhibitior + 0.7364 73.64%
P-glycoprotein substrate + 0.6331 63.31%
CYP3A4 substrate + 0.6479 64.79%
CYP2C9 substrate - 0.5928 59.28%
CYP2D6 substrate - 0.8990 89.90%
CYP3A4 inhibition - 0.7154 71.54%
CYP2C9 inhibition - 0.5914 59.14%
CYP2C19 inhibition - 0.7485 74.85%
CYP2D6 inhibition - 0.8841 88.41%
CYP1A2 inhibition - 0.5876 58.76%
CYP2C8 inhibition + 0.6200 62.00%
CYP inhibitory promiscuity - 0.8039 80.39%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8925 89.25%
Carcinogenicity (trinary) Non-required 0.6233 62.33%
Eye corrosion - 0.9853 98.53%
Eye irritation - 0.9152 91.52%
Skin irritation - 0.7645 76.45%
Skin corrosion - 0.9249 92.49%
Ames mutagenesis - 0.6154 61.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6469 64.69%
Micronuclear + 0.5900 59.00%
Hepatotoxicity + 0.6750 67.50%
skin sensitisation - 0.8278 82.78%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.7346 73.46%
Acute Oral Toxicity (c) III 0.5836 58.36%
Estrogen receptor binding + 0.7503 75.03%
Androgen receptor binding + 0.7449 74.49%
Thyroid receptor binding + 0.5867 58.67%
Glucocorticoid receptor binding + 0.5796 57.96%
Aromatase binding + 0.6108 61.08%
PPAR gamma + 0.6134 61.34%
Honey bee toxicity - 0.8105 81.05%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.9569 95.69%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 96.73% 98.95%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 91.74% 91.71%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 90.73% 89.34%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.71% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.57% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.13% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.96% 99.23%
CHEMBL255 P29275 Adenosine A2b receptor 86.45% 98.59%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.16% 90.08%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 84.91% 93.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.14% 97.25%
CHEMBL1781 P11387 DNA topoisomerase I 82.84% 97.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.81% 95.56%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.69% 96.90%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 80.48% 94.01%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 80.11% 83.57%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lycium chinense

Cross-Links

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PubChem 6433298
NPASS NPC46359