Urdamycin X

Details

Top
Internal ID c1056c5b-c19a-4c05-bbe4-3468b2421c62
Taxonomy Benzenoids > Anthracenes > Anthraquinones > Hydroxyanthraquinones
IUPAC Name (4R,5aS,13bR)-4,5a,9,13b-tetrahydroxy-4-methyl-3,5,6,7-tetrahydronaphtho[3,2-i][1]benzoxepine-2,8,13-trione
SMILES (Canonical) CC1(CC(=O)OC2(C3=C(CCC2(C1)O)C(=O)C4=C(C3=O)C=CC=C4O)O)O
SMILES (Isomeric) C[C@@]1(CC(=O)O[C@@]2(C3=C(CC[C@@]2(C1)O)C(=O)C4=C(C3=O)C=CC=C4O)O)O
InChI InChI=1S/C19H18O8/c1-17(24)7-12(21)27-19(26)14-10(5-6-18(19,25)8-17)15(22)13-9(16(14)23)3-2-4-11(13)20/h2-4,20,24-26H,5-8H2,1H3/t17-,18-,19+/m0/s1
InChI Key LMFCHEYYLAZODS-GBESFXJTSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C19H18O8
Molecular Weight 374.30 g/mol
Exact Mass 374.10016753 g/mol
Topological Polar Surface Area (TPSA) 141.00 Ų
XlogP -0.20
Atomic LogP (AlogP) 0.37
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 0

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of Urdamycin X

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9370 93.70%
Caco-2 - 0.7388 73.88%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability + 0.6429 64.29%
Subcellular localzation Mitochondria 0.7338 73.38%
OATP2B1 inhibitior - 0.7082 70.82%
OATP1B1 inhibitior + 0.8884 88.84%
OATP1B3 inhibitior + 0.9005 90.05%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.7141 71.41%
BSEP inhibitior - 0.7275 72.75%
P-glycoprotein inhibitior - 0.8944 89.44%
P-glycoprotein substrate - 0.7381 73.81%
CYP3A4 substrate + 0.6509 65.09%
CYP2C9 substrate - 0.7948 79.48%
CYP2D6 substrate - 0.8750 87.50%
CYP3A4 inhibition - 0.7952 79.52%
CYP2C9 inhibition - 0.7582 75.82%
CYP2C19 inhibition - 0.6566 65.66%
CYP2D6 inhibition - 0.9026 90.26%
CYP1A2 inhibition - 0.5662 56.62%
CYP2C8 inhibition - 0.6220 62.20%
CYP inhibitory promiscuity - 0.9545 95.45%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.5262 52.62%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.7437 74.37%
Skin irritation - 0.6157 61.57%
Skin corrosion - 0.9120 91.20%
Ames mutagenesis + 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5746 57.46%
Micronuclear - 0.6900 69.00%
Hepatotoxicity + 0.5791 57.91%
skin sensitisation - 0.7748 77.48%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.8021 80.21%
Acute Oral Toxicity (c) IV 0.3531 35.31%
Estrogen receptor binding + 0.7594 75.94%
Androgen receptor binding + 0.7663 76.63%
Thyroid receptor binding + 0.5468 54.68%
Glucocorticoid receptor binding + 0.7759 77.59%
Aromatase binding + 0.7711 77.11%
PPAR gamma + 0.7660 76.60%
Honey bee toxicity - 0.8979 89.79%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.9944 99.44%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.58% 98.95%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 98.17% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.69% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.88% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 93.79% 94.75%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.76% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.73% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.56% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.96% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.73% 94.00%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 83.91% 96.67%
CHEMBL3401 O75469 Pregnane X receptor 83.11% 94.73%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.79% 99.15%
CHEMBL4208 P20618 Proteasome component C5 81.70% 90.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.35% 100.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 80.16% 93.03%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 102083022
LOTUS LTS0243188
wikiData Q77516748