Tubercidin 5'-monophosphate

Details

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Internal ID 0a5fc11e-fd97-4097-af24-0a5f9b10e76d
Taxonomy Nucleosides, nucleotides, and analogues > Pyrrolopyrimidine nucleosides and nucleotides
IUPAC Name [(2R,3S,4R,5R)-5-(4-aminopyrrolo[2,3-d]pyrimidin-7-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate
SMILES (Canonical) C1=CN(C2=NC=NC(=C21)N)C3C(C(C(O3)COP(=O)(O)O)O)O
SMILES (Isomeric) C1=CN(C2=NC=NC(=C21)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI InChI=1S/C11H15N4O7P/c12-9-5-1-2-15(10(5)14-4-13-9)11-8(17)7(16)6(22-11)3-21-23(18,19)20/h1-2,4,6-8,11,16-17H,3H2,(H2,12,13,14)(H2,18,19,20)/t6-,7-,8-,11-/m1/s1
InChI Key OBKZXEICLJXEAO-KCGFPETGSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C11H15N4O7P
Molecular Weight 346.23 g/mol
Exact Mass 346.06783583 g/mol
Topological Polar Surface Area (TPSA) 173.00 Ų
XlogP -3.00
Atomic LogP (AlogP) -1.26
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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Tubercidin 5'-monophosphate
Tubercidin 5'-phosphate
16719-46-3
[(2R,3S,4R,5R)-5-(4-aminopyrrolo[2,3-d]pyrimidin-7-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate
7H-Pyrrolo(2,3-d)pyrimidin-4-amine, 7-(5-O-phosphono-beta-D-ribofuranosyl)-
tubercidin monophosphate
SCHEMBL15305338
CHEBI:74555
DTXSID20182554
28302-62-7
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Tubercidin 5'-monophosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5418 54.18%
Caco-2 - 0.8737 87.37%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.4199 41.99%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9541 95.41%
OATP1B3 inhibitior + 0.9473 94.73%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9377 93.77%
P-glycoprotein inhibitior - 0.8713 87.13%
P-glycoprotein substrate - 0.8745 87.45%
CYP3A4 substrate + 0.5301 53.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8648 86.48%
CYP3A4 inhibition - 0.9280 92.80%
CYP2C9 inhibition - 0.9326 93.26%
CYP2C19 inhibition - 0.9145 91.45%
CYP2D6 inhibition - 0.9208 92.08%
CYP1A2 inhibition - 0.9141 91.41%
CYP2C8 inhibition - 0.6974 69.74%
CYP inhibitory promiscuity - 0.9518 95.18%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5319 53.19%
Eye corrosion - 0.9870 98.70%
Eye irritation - 0.9606 96.06%
Skin irritation - 0.7628 76.28%
Skin corrosion - 0.9255 92.55%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6617 66.17%
Micronuclear + 1.0000 100.00%
Hepatotoxicity + 0.5173 51.73%
skin sensitisation - 0.8428 84.28%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.7929 79.29%
Acute Oral Toxicity (c) III 0.4705 47.05%
Estrogen receptor binding + 0.5743 57.43%
Androgen receptor binding + 0.5587 55.87%
Thyroid receptor binding + 0.5933 59.33%
Glucocorticoid receptor binding - 0.5474 54.74%
Aromatase binding + 0.8013 80.13%
PPAR gamma + 0.5433 54.33%
Honey bee toxicity - 0.7644 76.44%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity - 0.6267 62.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3137261 O14744 PRMT5/MEP50 complex 98.38% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.86% 96.09%
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 92.54% 80.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.58% 91.11%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 88.62% 94.01%
CHEMBL3401 O75469 Pregnane X receptor 88.51% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.18% 94.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.64% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.59% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.00% 96.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.42% 93.10%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.23% 99.17%
CHEMBL3891 P07384 Calpain 1 80.86% 93.04%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.82% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 3080705
LOTUS LTS0271316
wikiData Q27144730