Trachelogenin

Details

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Internal ID 5c6e151c-c3f2-4ce6-a576-5779bb1944eb
Taxonomy Lignans, neolignans and related compounds > Furanoid lignans > Tetrahydrofuran lignans > 9,9-epoxylignans > Dibenzylbutyrolactone lignans
IUPAC Name (3S,4S)-4-[(3,4-dimethoxyphenyl)methyl]-3-hydroxy-3-[(4-hydroxy-3-methoxyphenyl)methyl]oxolan-2-one
SMILES (Canonical) COC1=C(C=C(C=C1)CC2COC(=O)C2(CC3=CC(=C(C=C3)O)OC)O)OC
SMILES (Isomeric) COC1=C(C=C(C=C1)C[C@H]2COC(=O)[C@@]2(CC3=CC(=C(C=C3)O)OC)O)OC
InChI InChI=1S/C21H24O7/c1-25-17-7-5-13(9-19(17)27-3)8-15-12-28-20(23)21(15,24)11-14-4-6-16(22)18(10-14)26-2/h4-7,9-10,15,22,24H,8,11-12H2,1-3H3/t15-,21-/m0/s1
InChI Key YFVZKLQNMNKWSB-BTYIYWSLSA-N
Popularity 10 references in papers

Physical and Chemical Properties

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Molecular Formula C21H24O7
Molecular Weight 388.40 g/mol
Exact Mass 388.15220310 g/mol
Topological Polar Surface Area (TPSA) 94.40 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.11
H-Bond Acceptor 7
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

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34209-69-3
(-)-Trachelogenin
2(3H)-Furanone, dihydro-3-hydroxy-3-vanillyl-4-veratryl-
UNII-379VHZ3K1I
379VHZ3K1I
CHEBI:9647
(3S,4S)-4-[(3,4-dimethoxyphenyl)methyl]-3-hydroxy-3-[(4-hydroxy-3-methoxyphenyl)methyl]oxolan-2-one
2(3H)-Furanone, 4-[(3,4-dimethoxyphenyl)methyl]dihydro-3-hydroxy-3-[(4-hydroxy-3-methoxyphenyl)methyl]-, (3S,4S)-
2(3H)-Furanone, 4-((3,4-dimethoxyphenyl)methyl)dihydro-3-hydroxy-3-((4-hydroxy-3-methoxyphenyl)methyl)-, (3S,4S)-
(3S,4S)-4-[(3,4-dimethoxyphenyl)methyl]-3-hydroxy-3-[(4-hydroxy-3-methoxy-phenyl)methyl]tetrahydrofuran-2-one
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Trachelogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9477 94.77%
Caco-2 + 0.5798 57.98%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.8582 85.82%
OATP2B1 inhibitior - 0.8597 85.97%
OATP1B1 inhibitior + 0.9505 95.05%
OATP1B3 inhibitior + 0.9061 90.61%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7565 75.65%
P-glycoprotein inhibitior + 0.6389 63.89%
P-glycoprotein substrate - 0.6766 67.66%
CYP3A4 substrate + 0.5853 58.53%
CYP2C9 substrate - 0.6050 60.50%
CYP2D6 substrate - 0.7355 73.55%
CYP3A4 inhibition - 0.5908 59.08%
CYP2C9 inhibition - 0.6359 63.59%
CYP2C19 inhibition - 0.6050 60.50%
CYP2D6 inhibition - 0.9278 92.78%
CYP1A2 inhibition - 0.5623 56.23%
CYP2C8 inhibition + 0.5771 57.71%
CYP inhibitory promiscuity - 0.5964 59.64%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6005 60.05%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.8749 87.49%
Skin irritation - 0.8442 84.42%
Skin corrosion - 0.9679 96.79%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3989 39.89%
Micronuclear + 0.5007 50.07%
Hepatotoxicity + 0.5514 55.14%
skin sensitisation - 0.8699 86.99%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6891 68.91%
Acute Oral Toxicity (c) III 0.4848 48.48%
Estrogen receptor binding + 0.9131 91.31%
Androgen receptor binding + 0.6019 60.19%
Thyroid receptor binding + 0.7276 72.76%
Glucocorticoid receptor binding + 0.6958 69.58%
Aromatase binding + 0.6201 62.01%
PPAR gamma + 0.7245 72.45%
Honey bee toxicity - 0.8818 88.18%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9736 97.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.29% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.04% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.25% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.06% 85.14%
CHEMBL2581 P07339 Cathepsin D 93.42% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.07% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.90% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.60% 95.89%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 89.14% 92.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.71% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.96% 99.17%
CHEMBL2535 P11166 Glucose transporter 84.26% 98.75%
CHEMBL1255126 O15151 Protein Mdm4 83.98% 90.20%
CHEMBL5555 O00767 Acyl-CoA desaturase 82.95% 97.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.59% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.71% 89.00%
CHEMBL261 P00915 Carbonic anhydrase I 81.47% 96.76%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.03% 96.95%

Plants that contains it

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Cross-Links

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PubChem 452855
NPASS NPC31751
LOTUS LTS0098422
wikiData Q26359226