Tomenin

Details

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Internal ID 77b382f6-d771-4dee-a325-45fc7d855e7f
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Coumarin glycosides
IUPAC Name 6,7-dimethoxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-2-one
SMILES (Canonical) COC1=C(C(=C2C=CC(=O)OC2=C1)OC3C(C(C(C(O3)CO)O)O)O)OC
SMILES (Isomeric) COC1=C(C(=C2C=CC(=O)OC2=C1)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)OC
InChI InChI=1S/C17H20O10/c1-23-9-5-8-7(3-4-11(19)25-8)15(16(9)24-2)27-17-14(22)13(21)12(20)10(6-18)26-17/h3-5,10,12-14,17-18,20-22H,6H2,1-2H3/t10-,12-,13+,14-,17+/m1/s1
InChI Key DHNNEMKGTXETQO-HFVZKWEFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H20O10
Molecular Weight 384.30 g/mol
Exact Mass 384.10564683 g/mol
Topological Polar Surface Area (TPSA) 144.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -1.01
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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28446-08-4
CHEBI:191610
DTXSID601181798
6,7-dimethoxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-2-one
XT163804
5-(beta-D-Glucopyranosyloxy)-6,7-dimethoxy-2H-1-benzopyran-2-one

2D Structure

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2D Structure of Tomenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5891 58.91%
Caco-2 - 0.7416 74.16%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.5382 53.82%
OATP2B1 inhibitior - 0.8518 85.18%
OATP1B1 inhibitior + 0.9026 90.26%
OATP1B3 inhibitior + 0.9702 97.02%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.5878 58.78%
P-glycoprotein inhibitior - 0.7933 79.33%
P-glycoprotein substrate - 0.7375 73.75%
CYP3A4 substrate + 0.5467 54.67%
CYP2C9 substrate - 0.8306 83.06%
CYP2D6 substrate - 0.8491 84.91%
CYP3A4 inhibition - 0.8887 88.87%
CYP2C9 inhibition - 0.9431 94.31%
CYP2C19 inhibition - 0.9262 92.62%
CYP2D6 inhibition - 0.9179 91.79%
CYP1A2 inhibition - 0.8804 88.04%
CYP2C8 inhibition - 0.5940 59.40%
CYP inhibitory promiscuity - 0.8059 80.59%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7283 72.83%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9491 94.91%
Skin irritation - 0.8272 82.72%
Skin corrosion - 0.9636 96.36%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4760 47.60%
Micronuclear + 0.6133 61.33%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.8824 88.24%
Acute Oral Toxicity (c) III 0.7037 70.37%
Estrogen receptor binding + 0.6826 68.26%
Androgen receptor binding + 0.6629 66.29%
Thyroid receptor binding - 0.6091 60.91%
Glucocorticoid receptor binding + 0.7578 75.78%
Aromatase binding + 0.6050 60.50%
PPAR gamma + 0.5749 57.49%
Honey bee toxicity - 0.8120 81.20%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6649 66.49%
Fish aquatic toxicity + 0.6994 69.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.78% 91.11%
CHEMBL220 P22303 Acetylcholinesterase 95.95% 94.45%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.67% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.16% 96.09%
CHEMBL2581 P07339 Cathepsin D 92.02% 98.95%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 91.69% 94.03%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.97% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.83% 95.56%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.61% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.07% 99.17%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 87.12% 89.62%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.09% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.00% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 81.75% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.22% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Prunus tomentosa
Solanum lycopersicum

Cross-Links

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PubChem 5321970
NPASS NPC299414