Tomatine

Details

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Internal ID abe1c50f-9856-4239-bf99-4a4ba8907488
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,5'S,6S,7S,8R,9S,12S,13S,16S,18S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-piperidine]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)C)C)C)NC1
SMILES (Isomeric) C[C@H]1CC[C@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O[C@H]9[C@@H]([C@H]([C@@H](CO9)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)C)C)C)NC1
InChI InChI=1S/C50H83NO21/c1-20-7-12-50(51-15-20)21(2)32-28(72-50)14-26-24-6-5-22-13-23(8-10-48(22,3)25(24)9-11-49(26,32)4)65-45-40(63)37(60)41(31(18-54)68-45)69-47-43(71-46-39(62)36(59)34(57)29(16-52)66-46)42(35(58)30(17-53)67-47)70-44-38(61)33(56)27(55)19-64-44/h20-47,51-63H,5-19H2,1-4H3/t20-,21-,22-,23-,24+,25-,26-,27+,28-,29+,30+,31+,32-,33-,34+,35+,36-,37+,38+,39+,40+,41-,42-,43+,44-,45+,46-,47-,48-,49-,50-/m0/s1
InChI Key REJLGAUYTKNVJM-SGXCCWNXSA-N
Popularity 271 references in papers

Physical and Chemical Properties

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Molecular Formula C50H83NO21
Molecular Weight 1034.20 g/mol
Exact Mass 1033.54575866 g/mol
Topological Polar Surface Area (TPSA) 338.00 Ų
XlogP -0.70

Synonyms

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Lycopersicin
alpha-Tomatine
A''-Tomatidine
17406-45-0
Tomatin
CHEBI:9630
Tomatidine, glycoside
DTXSID5040413
beta-D-Galactopyranoside, (3beta,5alpha,22beta,25S)-spirosolan-3-yl O-beta-D-glucopyranosyl-(1-->2)-O-[beta-D-xylopyranosyl-(1-->3)]-O-beta-D-glucopyranosyl-(1-->4)-
31U6547O08
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Tomatine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.60% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 98.02% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.68% 91.11%
CHEMBL233 P35372 Mu opioid receptor 95.22% 97.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.16% 97.25%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 94.37% 95.58%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.31% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 94.18% 96.61%
CHEMBL237 P41145 Kappa opioid receptor 92.73% 98.10%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.80% 96.21%
CHEMBL204 P00734 Thrombin 91.78% 96.01%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.65% 92.94%
CHEMBL226 P30542 Adenosine A1 receptor 89.53% 95.93%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.45% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.21% 100.00%
CHEMBL2996 Q05655 Protein kinase C delta 88.95% 97.79%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 88.62% 89.05%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 88.54% 97.31%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.19% 91.24%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 88.14% 96.67%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 87.91% 92.88%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.62% 96.77%
CHEMBL206 P03372 Estrogen receptor alpha 87.23% 97.64%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 86.58% 97.86%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 86.16% 92.86%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 85.54% 97.50%
CHEMBL4581 P52732 Kinesin-like protein 1 85.41% 93.18%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 83.94% 95.36%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.86% 95.89%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 83.86% 91.83%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 82.60% 91.03%
CHEMBL5255 O00206 Toll-like receptor 4 82.33% 92.50%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.24% 96.38%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.91% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.84% 94.00%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 80.86% 99.17%
CHEMBL4302 P08183 P-glycoprotein 1 80.75% 92.98%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.42% 95.83%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum acaule
Solanum demissum
Solanum lycopersicoides
Solanum lycopersicum
Solanum tuberosum

Cross-Links

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PubChem 28523
LOTUS LTS0242825
wikiData Q288051