Tokorogenin

Details

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Internal ID 8378d71b-34b3-49bf-bd0a-20d5d35cb79f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1S,2S,4S,5'R,6R,7S,8R,9S,12S,13S,14S,15R,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-14,15,16-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(C(C(C(C6)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC[C@H]6[C@@]5([C@@H]([C@@H]([C@H](C6)O)O)O)C)C)C)OC1
InChI InChI=1S/C27H44O5/c1-14-7-10-27(31-13-14)15(2)22-21(32-27)12-19-17-6-5-16-11-20(28)23(29)24(30)26(16,4)18(17)8-9-25(19,22)3/h14-24,28-30H,5-13H2,1-4H3/t14-,15+,16-,17-,18+,19+,20+,21+,22+,23-,24-,25+,26+,27-/m1/s1
InChI Key SRTGQBIWSBCVSM-RXWDRLOESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C27H44O5
Molecular Weight 448.60 g/mol
Exact Mass 448.31887450 g/mol
Topological Polar Surface Area (TPSA) 79.20 Ų
XlogP 4.50
Atomic LogP (AlogP) 3.74
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 0

Synonyms

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(25R)-5beta-spirostan-1beta,2beta,3alpha-triol
C27H44O5
CHEBI:186718
LMST01080027
(1S,2S,4S,5'R,6R,7S,8R,9S,12S,13S,14S,15R,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-14,15,16-triol

2D Structure

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2D Structure of Tokorogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7027 70.27%
Caco-2 - 0.6901 69.01%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.6312 63.12%
OATP2B1 inhibitior - 0.5796 57.96%
OATP1B1 inhibitior + 0.9361 93.61%
OATP1B3 inhibitior + 0.9057 90.57%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.7831 78.31%
P-glycoprotein inhibitior - 0.6724 67.24%
P-glycoprotein substrate - 0.5993 59.93%
CYP3A4 substrate + 0.7138 71.38%
CYP2C9 substrate - 0.7896 78.96%
CYP2D6 substrate - 0.7545 75.45%
CYP3A4 inhibition - 0.9564 95.64%
CYP2C9 inhibition - 0.9386 93.86%
CYP2C19 inhibition - 0.9340 93.40%
CYP2D6 inhibition - 0.9592 95.92%
CYP1A2 inhibition - 0.8913 89.13%
CYP2C8 inhibition + 0.4631 46.31%
CYP inhibitory promiscuity - 0.9821 98.21%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5760 57.60%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9368 93.68%
Skin irritation - 0.5861 58.61%
Skin corrosion - 0.9314 93.14%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4532 45.32%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.9202 92.02%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.7476 74.76%
Acute Oral Toxicity (c) I 0.5423 54.23%
Estrogen receptor binding + 0.6555 65.55%
Androgen receptor binding + 0.6032 60.32%
Thyroid receptor binding + 0.5988 59.88%
Glucocorticoid receptor binding + 0.7013 70.13%
Aromatase binding + 0.7592 75.92%
PPAR gamma + 0.5190 51.90%
Honey bee toxicity - 0.5948 59.48%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity + 0.8485 84.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.75% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.06% 100.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.82% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.40% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.28% 92.94%
CHEMBL1914 P06276 Butyrylcholinesterase 86.25% 95.00%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 85.16% 97.31%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.95% 82.69%
CHEMBL259 P32245 Melanocortin receptor 4 84.36% 95.38%
CHEMBL221 P23219 Cyclooxygenase-1 84.00% 90.17%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 83.73% 95.58%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 83.29% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.01% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.84% 96.38%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.55% 89.00%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 81.64% 95.48%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.35% 95.89%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.21% 96.77%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.20% 93.04%
CHEMBL237 P41145 Kappa opioid receptor 80.93% 98.10%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.44% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.37% 97.25%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea tokoro
Hydrangea chinensis
Melicope semecarpifolia

Cross-Links

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PubChem 20841762
NPASS NPC96338
LOTUS LTS0272499
wikiData Q76511909