Syringolide 1

Details

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Internal ID 7b08e661-f840-49de-9c6c-006d145ba2c9
Taxonomy Organoheterocyclic compounds > Furofurans
IUPAC Name (1R,4R,5S,7R,8S)-4,7-dihydroxy-7-pentyl-2,6,10-trioxatricyclo[6.3.0.01,5]undecan-9-one
SMILES (Canonical) CCCCCC1(C2C(=O)OCC23C(O1)C(CO3)O)O
SMILES (Isomeric) CCCCC[C@@]1([C@H]2C(=O)OC[C@@]23[C@@H](O1)[C@@H](CO3)O)O
InChI InChI=1S/C13H20O6/c1-2-3-4-5-13(16)9-11(15)17-7-12(9)10(19-13)8(14)6-18-12/h8-10,14,16H,2-7H2,1H3/t8-,9+,10+,12+,13-/m1/s1
InChI Key KFHLOSLXXIXBMW-YTCQTTRASA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C13H20O6
Molecular Weight 272.29 g/mol
Exact Mass 272.12598835 g/mol
Topological Polar Surface Area (TPSA) 85.20 Ų
XlogP 0.10
Atomic LogP (AlogP) -0.04
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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(1R,4R,5S,7R,8S)-4,7-dihydroxy-7-pentyl-2,6,10-trioxatricyclo[6.3.0.01,5]undecan-9-one
(1R,4R,5S,7R,8S)-4,7-dihydroxy-7-pentyl-2,6,10-trioxatricyclo(6.3.0.01,5)undecan-9-one
RefChem:187008
SCHEMBL29884213
CHEBI:199112

2D Structure

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2D Structure of Syringolide 1

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9696 96.96%
Caco-2 - 0.6508 65.08%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.6138 61.38%
OATP2B1 inhibitior - 0.8513 85.13%
OATP1B1 inhibitior + 0.9168 91.68%
OATP1B3 inhibitior + 0.9393 93.93%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.7300 73.00%
P-glycoprotein inhibitior - 0.9386 93.86%
P-glycoprotein substrate + 0.6703 67.03%
CYP3A4 substrate + 0.5445 54.45%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8697 86.97%
CYP3A4 inhibition - 0.8985 89.85%
CYP2C9 inhibition - 0.8842 88.42%
CYP2C19 inhibition - 0.8243 82.43%
CYP2D6 inhibition - 0.9511 95.11%
CYP1A2 inhibition - 0.8274 82.74%
CYP2C8 inhibition - 0.8732 87.32%
CYP inhibitory promiscuity - 0.9757 97.57%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.4961 49.61%
Eye corrosion - 0.9875 98.75%
Eye irritation - 0.9232 92.32%
Skin irritation - 0.6921 69.21%
Skin corrosion - 0.9391 93.91%
Ames mutagenesis - 0.5978 59.78%
Human Ether-a-go-go-Related Gene inhibition - 0.7534 75.34%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.5819 58.19%
skin sensitisation - 0.9270 92.70%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.5588 55.88%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity + 0.7130 71.30%
Acute Oral Toxicity (c) III 0.5305 53.05%
Estrogen receptor binding + 0.5348 53.48%
Androgen receptor binding + 0.5676 56.76%
Thyroid receptor binding - 0.5316 53.16%
Glucocorticoid receptor binding + 0.5850 58.50%
Aromatase binding - 0.7799 77.99%
PPAR gamma - 0.5856 58.56%
Honey bee toxicity - 0.9095 90.95%
Biodegradation + 0.5250 52.50%
Crustacea aquatic toxicity + 0.5621 56.21%
Fish aquatic toxicity + 0.7719 77.19%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.33% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.40% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.76% 97.25%
CHEMBL299 P17252 Protein kinase C alpha 90.48% 98.03%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.06% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.59% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.63% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.26% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.93% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.60% 100.00%
CHEMBL230 P35354 Cyclooxygenase-2 82.07% 89.63%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.61% 100.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.89% 96.77%
CHEMBL3401 O75469 Pregnane X receptor 80.25% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.18% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 11747697
LOTUS LTS0092485
wikiData Q75064406