Syringetin 3-rhamnoside

Details

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Internal ID 3a4c4ee4-c63d-4f61-9729-382d2a8f68a6
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 5,7-dihydroxy-2-(4-hydroxy-3,5-dimethoxyphenyl)-3-[(2S,3S,5R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2=C(OC3=CC(=CC(=C3C2=O)O)O)C4=CC(=C(C(=C4)OC)O)OC)O)O)O
SMILES (Isomeric) CC1[C@@H](C([C@@H]([C@@H](O1)OC2=C(OC3=CC(=CC(=C3C2=O)O)O)C4=CC(=C(C(=C4)OC)O)OC)O)O)O
InChI InChI=1S/C23H24O12/c1-8-16(26)19(29)20(30)23(33-8)35-22-18(28)15-11(25)6-10(24)7-12(15)34-21(22)9-4-13(31-2)17(27)14(5-9)32-3/h4-8,16,19-20,23-27,29-30H,1-3H3/t8?,16-,19?,20-,23-/m0/s1
InChI Key MYIRTOOWWKKWIT-YQJCILLHSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H24O12
Molecular Weight 492.40 g/mol
Exact Mass 492.12677620 g/mol
Topological Polar Surface Area (TPSA) 185.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 0.80
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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LMPK12112494

2D Structure

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2D Structure of Syringetin 3-rhamnoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7908 79.08%
Caco-2 - 0.8201 82.01%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6385 63.85%
OATP2B1 inhibitior - 0.5587 55.87%
OATP1B1 inhibitior + 0.8839 88.39%
OATP1B3 inhibitior + 0.8712 87.12%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.5169 51.69%
P-glycoprotein inhibitior + 0.5830 58.30%
P-glycoprotein substrate + 0.5184 51.84%
CYP3A4 substrate + 0.6243 62.43%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8527 85.27%
CYP3A4 inhibition - 0.7793 77.93%
CYP2C9 inhibition - 0.9748 97.48%
CYP2C19 inhibition - 0.9206 92.06%
CYP2D6 inhibition - 0.9240 92.40%
CYP1A2 inhibition - 0.7894 78.94%
CYP2C8 inhibition + 0.8154 81.54%
CYP inhibitory promiscuity - 0.6067 60.67%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5397 53.97%
Eye corrosion - 0.9858 98.58%
Eye irritation - 0.8217 82.17%
Skin irritation - 0.7365 73.65%
Skin corrosion - 0.9558 95.58%
Ames mutagenesis + 0.5163 51.63%
Human Ether-a-go-go-Related Gene inhibition - 0.6856 68.56%
Micronuclear + 0.8800 88.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.9317 93.17%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.8160 81.60%
Acute Oral Toxicity (c) II 0.4554 45.54%
Estrogen receptor binding + 0.8239 82.39%
Androgen receptor binding + 0.5952 59.52%
Thyroid receptor binding + 0.5479 54.79%
Glucocorticoid receptor binding + 0.7985 79.85%
Aromatase binding + 0.5287 52.87%
PPAR gamma + 0.6716 67.16%
Honey bee toxicity - 0.7862 78.62%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5049 50.49%
Fish aquatic toxicity + 0.9209 92.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.06% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.95% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.81% 94.00%
CHEMBL2581 P07339 Cathepsin D 94.48% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.74% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.64% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.44% 85.14%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 90.88% 95.64%
CHEMBL3714130 P46095 G-protein coupled receptor 6 90.73% 97.36%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.52% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.84% 99.17%
CHEMBL3194 P02766 Transthyretin 88.71% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 88.46% 94.73%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.97% 92.94%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 86.19% 90.71%
CHEMBL1951 P21397 Monoamine oxidase A 85.77% 91.49%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.94% 99.23%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 83.31% 94.42%
CHEMBL4208 P20618 Proteasome component C5 83.19% 90.00%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 82.67% 94.03%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 82.11% 99.15%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Elegia deusta
Lysimachia congestiflora

Cross-Links

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PubChem 44259498
LOTUS LTS0014419
wikiData Q104393598