Synechobactin A

Details

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Internal ID 3a3f3e7e-6fdc-4145-b28e-5d0d31728da6
Taxonomy Lipids and lipid-like molecules > Fatty Acyls > Fatty acids and conjugates > Hydroxy fatty acids
IUPAC Name 2-[2-[3-[acetyl(hydroxy)amino]propylamino]-2-oxoethyl]-4-[3-[dodecanoyl(hydroxy)amino]propylamino]-2-hydroxy-4-oxobutanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C26H48N4O9/c1-3-4-5-6-7-8-9-10-11-14-24(34)30(39)18-13-16-28-23(33)20-26(37,25(35)36)19-22(32)27-15-12-17-29(38)21(2)31/h37-39H,3-20H2,1-2H3,(H,27,32)(H,28,33)(H,35,36)
InChI Key PBPRFAHEEMSBKU-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C26H48N4O9
Molecular Weight 560.70 g/mol
Exact Mass 560.34212912 g/mol
Topological Polar Surface Area (TPSA) 197.00 Ų
XlogP 1.40
Atomic LogP (AlogP) 1.97
H-Bond Acceptor 8
H-Bond Donor 6
Rotatable Bonds 23

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Synechobactin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6174 61.74%
Caco-2 - 0.8533 85.33%
Blood Brain Barrier + 0.6330 63.30%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6595 65.95%
OATP2B1 inhibitior - 0.7178 71.78%
OATP1B1 inhibitior + 0.8774 87.74%
OATP1B3 inhibitior + 0.9350 93.50%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.5794 57.94%
P-glycoprotein inhibitior + 0.6215 62.15%
P-glycoprotein substrate + 0.5175 51.75%
CYP3A4 substrate + 0.5713 57.13%
CYP2C9 substrate - 0.5872 58.72%
CYP2D6 substrate - 0.8686 86.86%
CYP3A4 inhibition - 0.7087 70.87%
CYP2C9 inhibition - 0.7979 79.79%
CYP2C19 inhibition - 0.7417 74.17%
CYP2D6 inhibition - 0.8850 88.50%
CYP1A2 inhibition - 0.8116 81.16%
CYP2C8 inhibition - 0.8283 82.83%
CYP inhibitory promiscuity - 0.9419 94.19%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.5800 58.00%
Carcinogenicity (trinary) Non-required 0.5159 51.59%
Eye corrosion - 0.9786 97.86%
Eye irritation - 0.8529 85.29%
Skin irritation - 0.7899 78.99%
Skin corrosion - 0.9350 93.50%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5799 57.99%
Micronuclear + 0.7500 75.00%
Hepatotoxicity + 0.5166 51.66%
skin sensitisation - 0.8315 83.15%
Respiratory toxicity - 0.5889 58.89%
Reproductive toxicity - 0.6556 65.56%
Mitochondrial toxicity + 0.6500 65.00%
Nephrotoxicity + 0.7893 78.93%
Acute Oral Toxicity (c) III 0.5903 59.03%
Estrogen receptor binding + 0.6953 69.53%
Androgen receptor binding + 0.6760 67.60%
Thyroid receptor binding + 0.5184 51.84%
Glucocorticoid receptor binding - 0.4920 49.20%
Aromatase binding + 0.5763 57.63%
PPAR gamma + 0.5647 56.47%
Honey bee toxicity - 0.9378 93.78%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity + 0.7130 71.30%
Fish aquatic toxicity + 0.7562 75.62%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.61% 98.95%
CHEMBL4040 P28482 MAP kinase ERK2 97.22% 83.82%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.69% 99.17%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 94.00% 97.29%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.13% 96.09%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 89.16% 92.08%
CHEMBL3401 O75469 Pregnane X receptor 87.54% 94.73%
CHEMBL2664 P23526 Adenosylhomocysteinase 87.23% 86.67%
CHEMBL230 P35354 Cyclooxygenase-2 87.06% 89.63%
CHEMBL5255 O00206 Toll-like receptor 4 83.49% 92.50%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.75% 96.90%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.18% 100.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.62% 93.56%
CHEMBL256 P0DMS8 Adenosine A3 receptor 81.39% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 21778355
LOTUS LTS0175757
wikiData Q104246378