Svetamycin C

Details

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Internal ID d68d4f92-54bd-40b8-846a-4ad5578c7799
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (3R,5S,10S,13S,14S,15R,23S,26S)-5-chloro-14,15-dihydroxy-23-(hydroxymethyl)-10,23,29,29-tetramethyl-21-oxa-1,7,8,11,17,18,24,30-octazatetracyclo[24.4.0.03,8.013,18]triacont-16-ene-2,9,12,19,22,25-hexone
SMILES (Canonical) CC1C(=O)N2C(CC(CN2)Cl)C(=O)N3C(CCC(N3)(C)C)C(=O)NC(C(=O)OCC(=O)N4C(C(C(C=N4)O)O)C(=O)N1)(C)CO
SMILES (Isomeric) C[C@H]1C(=O)N2[C@H](C[C@@H](CN2)Cl)C(=O)N3[C@@H](CCC(N3)(C)C)C(=O)N[C@@](C(=O)OCC(=O)N4[C@@H]([C@@H]([C@@H](C=N4)O)O)C(=O)N1)(C)CO
InChI InChI=1S/C26H39ClN8O10/c1-12-22(42)33-15(7-13(27)8-28-33)23(43)34-14(5-6-25(2,3)32-34)20(40)31-26(4,11-36)24(44)45-10-17(38)35-18(21(41)30-12)19(39)16(37)9-29-35/h9,12-16,18-19,28,32,36-37,39H,5-8,10-11H2,1-4H3,(H,30,41)(H,31,40)/t12-,13-,14-,15+,16+,18-,19+,26-/m0/s1
InChI Key KBWDESYXICMIBW-WIBSRNQJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H39ClN8O10
Molecular Weight 659.10 g/mol
Exact Mass 658.2477672 g/mol
Topological Polar Surface Area (TPSA) 243.00 Ų
XlogP -2.50
Atomic LogP (AlogP) -4.18
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Svetamycin C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5377 53.77%
Caco-2 - 0.8501 85.01%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.4953 49.53%
OATP2B1 inhibitior - 0.5765 57.65%
OATP1B1 inhibitior + 0.8209 82.09%
OATP1B3 inhibitior + 0.9297 92.97%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8645 86.45%
P-glycoprotein inhibitior + 0.6738 67.38%
P-glycoprotein substrate + 0.7041 70.41%
CYP3A4 substrate + 0.7264 72.64%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8423 84.23%
CYP3A4 inhibition - 0.8736 87.36%
CYP2C9 inhibition - 0.7558 75.58%
CYP2C19 inhibition - 0.6630 66.30%
CYP2D6 inhibition - 0.8728 87.28%
CYP1A2 inhibition - 0.8144 81.44%
CYP2C8 inhibition + 0.6120 61.20%
CYP inhibitory promiscuity - 0.9425 94.25%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.7600 76.00%
Carcinogenicity (trinary) Non-required 0.4665 46.65%
Eye corrosion - 0.9794 97.94%
Eye irritation - 0.9257 92.57%
Skin irritation - 0.7593 75.93%
Skin corrosion - 0.9162 91.62%
Ames mutagenesis + 0.5152 51.52%
Human Ether-a-go-go-Related Gene inhibition - 0.5220 52.20%
Micronuclear + 0.8400 84.00%
Hepatotoxicity + 0.5750 57.50%
skin sensitisation - 0.8171 81.71%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.6752 67.52%
Acute Oral Toxicity (c) III 0.5844 58.44%
Estrogen receptor binding + 0.7650 76.50%
Androgen receptor binding + 0.6894 68.94%
Thyroid receptor binding + 0.5795 57.95%
Glucocorticoid receptor binding + 0.6776 67.76%
Aromatase binding + 0.6890 68.90%
PPAR gamma + 0.6832 68.32%
Honey bee toxicity - 0.6494 64.94%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.7400 74.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.59% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.68% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.47% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.51% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.33% 97.25%
CHEMBL2581 P07339 Cathepsin D 90.26% 98.95%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.08% 90.08%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.10% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.40% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.35% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.50% 100.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 84.31% 89.05%
CHEMBL204 P00734 Thrombin 83.51% 96.01%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.11% 99.23%
CHEMBL1859 O95180 Voltage-gated T-type calcium channel alpha-1H subunit 82.09% 98.57%
CHEMBL4829 O00763 Acetyl-CoA carboxylase 2 81.39% 98.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.82% 89.00%
CHEMBL221 P23219 Cyclooxygenase-1 80.22% 90.17%
CHEMBL3310 Q96DB2 Histone deacetylase 11 80.12% 88.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139591394
LOTUS LTS0148594
wikiData Q105138569