Surugamide B

Details

Top
Internal ID e0de87fc-2b06-479c-a45e-d7d3d6aa5990
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Oligopeptides
IUPAC Name (3S,6R,9S,12R,15S,18R,21R,24S)-3-(4-aminobutyl)-21-benzyl-9,15,24-tris[(2S)-butan-2-yl]-12-methyl-18-(2-methylpropyl)-6-propan-2-yl-1,4,7,10,13,16,19,22-octazacyclotetracosane-2,5,8,11,14,17,20,23-octone
SMILES (Canonical) CCC(C)C1C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N1)C)C(C)CC)CC(C)C)CC2=CC=CC=C2)C(C)CC)CCCCN)C(C)C
SMILES (Isomeric) CC[C@H](C)[C@H]1C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@@H](C(=O)N1)C)[C@@H](C)CC)CC(C)C)CC2=CC=CC=C2)[C@@H](C)CC)CCCCN)C(C)C
InChI InChI=1S/C47H79N9O8/c1-12-28(8)37-45(62)49-31(11)40(57)54-39(30(10)14-3)47(64)53-36(27(6)7)44(61)50-33(22-18-19-23-48)41(58)55-38(29(9)13-2)46(63)52-35(25-32-20-16-15-17-21-32)42(59)51-34(24-26(4)5)43(60)56-37/h15-17,20-21,26-31,33-39H,12-14,18-19,22-25,48H2,1-11H3,(H,49,62)(H,50,61)(H,51,59)(H,52,63)(H,53,64)(H,54,57)(H,55,58)(H,56,60)/t28-,29-,30-,31+,33-,34+,35+,36+,37-,38-,39-/m0/s1
InChI Key IEWHPTFFMRBBPQ-NPSZZZSPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C47H79N9O8
Molecular Weight 898.20 g/mol
Exact Mass 897.60516051 g/mol
Topological Polar Surface Area (TPSA) 259.00 Ų
XlogP 5.60
Atomic LogP (AlogP) 2.11
H-Bond Acceptor 9
H-Bond Donor 9
Rotatable Bonds 15

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of Surugamide B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9632 96.32%
Caco-2 - 0.8619 86.19%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability + 0.6857 68.57%
Subcellular localzation Mitochondria 0.5370 53.70%
OATP2B1 inhibitior - 0.5696 56.96%
OATP1B1 inhibitior + 0.8698 86.98%
OATP1B3 inhibitior + 0.9415 94.15%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9196 91.96%
P-glycoprotein inhibitior + 0.7607 76.07%
P-glycoprotein substrate + 0.8544 85.44%
CYP3A4 substrate + 0.5838 58.38%
CYP2C9 substrate - 0.8074 80.74%
CYP2D6 substrate - 0.7302 73.02%
CYP3A4 inhibition - 0.8105 81.05%
CYP2C9 inhibition - 0.9064 90.64%
CYP2C19 inhibition - 0.8173 81.73%
CYP2D6 inhibition - 0.9403 94.03%
CYP1A2 inhibition - 0.8810 88.10%
CYP2C8 inhibition + 0.4503 45.03%
CYP inhibitory promiscuity - 0.9876 98.76%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7300 73.00%
Carcinogenicity (trinary) Non-required 0.6880 68.80%
Eye corrosion - 0.9869 98.69%
Eye irritation - 0.9085 90.85%
Skin irritation - 0.7882 78.82%
Skin corrosion - 0.9194 91.94%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6850 68.50%
Micronuclear + 0.6100 61.00%
Hepatotoxicity + 0.5854 58.54%
skin sensitisation - 0.8923 89.23%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.8262 82.62%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.6849 68.49%
Acute Oral Toxicity (c) III 0.7082 70.82%
Estrogen receptor binding + 0.7813 78.13%
Androgen receptor binding + 0.6922 69.22%
Thyroid receptor binding + 0.5347 53.47%
Glucocorticoid receptor binding + 0.6514 65.14%
Aromatase binding + 0.6359 63.59%
PPAR gamma + 0.7732 77.32%
Honey bee toxicity - 0.8364 83.64%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity - 0.3951 39.51%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.29% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.60% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.92% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 94.30% 90.17%
CHEMBL1949 P62937 Cyclophilin A 92.47% 98.57%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.29% 91.11%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 91.13% 91.71%
CHEMBL1937 Q92769 Histone deacetylase 2 90.81% 94.75%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 90.74% 96.47%
CHEMBL3492 P49721 Proteasome Macropain subunit 88.92% 90.24%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.73% 86.33%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 88.45% 97.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.62% 97.09%
CHEMBL4581 P52732 Kinesin-like protein 1 86.23% 93.18%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.67% 95.50%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 84.56% 97.64%
CHEMBL3401 O75469 Pregnane X receptor 82.65% 94.73%
CHEMBL1293287 P14735 Insulin-degrading enzyme 81.14% 88.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.23% 94.45%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 71764190
LOTUS LTS0117849
wikiData Q77420925