methyl (1R,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-[[(1R,3R,5S,8S,10S,12S,14S)-5,14-dimethyl-6-oxo-2,4,9,13-tetraoxatricyclo[8.4.0.03,8]tetradecan-12-yl]oxy]-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-6,11-dioxo-2-(2-oxopropyl)-3,4-dihydro-1H-tetracene-1-carboxylate

Details

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Internal ID f060586f-82de-4096-a368-9e2ec912ef9d
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name methyl (1R,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-[[(1R,3R,5S,8S,10S,12S,14S)-5,14-dimethyl-6-oxo-2,4,9,13-tetraoxatricyclo[8.4.0.03,8]tetradecan-12-yl]oxy]-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-6,11-dioxo-2-(2-oxopropyl)-3,4-dihydro-1H-tetracene-1-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C43H51NO16/c1-17(45)15-43(52)16-29(33-22(35(43)41(51)53-7)11-23-34(38(33)50)37(49)32-21(36(23)48)9-8-10-25(32)46)58-30-12-24(44(5)6)39(19(3)54-30)59-31-14-27-40(20(4)55-31)60-42-28(57-27)13-26(47)18(2)56-42/h8-11,18-20,24,27-31,35,39-40,42,46,50,52H,12-16H2,1-7H3/t18-,19-,20-,24-,27-,28-,29-,30-,31-,35-,39+,40+,42-,43+/m0/s1
InChI Key DONDQYGRHMLYMF-YVPSEDBZSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C43H51NO16
Molecular Weight 837.90 g/mol
Exact Mass 837.32078454 g/mol
Topological Polar Surface Area (TPSA) 223.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.74
H-Bond Acceptor 17
H-Bond Donor 3
Rotatable Bonds 8

Synonyms

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78193-30-3
methyl (1R,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-[[(1R,3R,5S,8S,10S,12S,14S)-5,14-dimethyl-6-oxo-2,4,9,13-tetraoxatricyclo[8.4.0.03,8]tetradecan-12-yl]oxy]-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-6,11-dioxo-2-(2-oxopropyl)-3,4-dihydro-1H-tetracene-1-carboxylate
DONDQYGRHMLYMF-YVPSEDBZSA-N
1-Naphthacenecarboxylic acid, 4-(((2''',3''-anhydro)-O-3,6-dideoxy-alpha-L-erythro-hexopyranos-4-ulosyl-(1-4)-O-2,6-dideoxy-alpha-L-lyxo-hexopyranosyl-(1-4)-2,3,6-trideoxy-3-(dimethylamino)-alpha-L-lyxo-hexopyranosyl)oxy)-1,2,3,4,6,11-hexahydro-2,5,7-trihydroxy-6,11-dioxo-2-(2-oxopropyl)-, methyl ester, (1R-(1-alpha,2-beta,4-beta))-

2D Structure

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2D Structure of methyl (1R,2S,4S)-4-[(2R,4S,5S,6S)-4-(dimethylamino)-5-[[(1R,3R,5S,8S,10S,12S,14S)-5,14-dimethyl-6-oxo-2,4,9,13-tetraoxatricyclo[8.4.0.03,8]tetradecan-12-yl]oxy]-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-6,11-dioxo-2-(2-oxopropyl)-3,4-dihydro-1H-tetracene-1-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7543 75.43%
Caco-2 - 0.8641 86.41%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Lysosomes 0.4138 41.38%
OATP2B1 inhibitior - 0.7176 71.76%
OATP1B1 inhibitior + 0.8550 85.50%
OATP1B3 inhibitior + 0.9385 93.85%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.8419 84.19%
P-glycoprotein inhibitior + 0.7700 77.00%
P-glycoprotein substrate + 0.8643 86.43%
CYP3A4 substrate + 0.7451 74.51%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8487 84.87%
CYP3A4 inhibition - 0.8120 81.20%
CYP2C9 inhibition - 0.8968 89.68%
CYP2C19 inhibition - 0.8969 89.69%
CYP2D6 inhibition - 0.7439 74.39%
CYP1A2 inhibition + 0.5284 52.84%
CYP2C8 inhibition + 0.6712 67.12%
CYP inhibitory promiscuity - 0.8729 87.29%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5446 54.46%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9080 90.80%
Skin irritation - 0.8066 80.66%
Skin corrosion - 0.9369 93.69%
Ames mutagenesis + 0.9400 94.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4175 41.75%
Micronuclear + 0.5800 58.00%
Hepatotoxicity + 0.7625 76.25%
skin sensitisation - 0.8961 89.61%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.6965 69.65%
Acute Oral Toxicity (c) III 0.5046 50.46%
Estrogen receptor binding + 0.8750 87.50%
Androgen receptor binding + 0.8400 84.00%
Thyroid receptor binding + 0.5534 55.34%
Glucocorticoid receptor binding + 0.8464 84.64%
Aromatase binding + 0.7717 77.17%
PPAR gamma + 0.8208 82.08%
Honey bee toxicity - 0.6465 64.65%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9313 93.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.86% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.77% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.52% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.73% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.11% 85.14%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 95.50% 96.38%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.30% 99.23%
CHEMBL340 P08684 Cytochrome P450 3A4 93.00% 91.19%
CHEMBL226 P30542 Adenosine A1 receptor 92.08% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.04% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.81% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.87% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.95% 97.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 87.88% 92.62%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 87.70% 96.21%
CHEMBL4208 P20618 Proteasome component C5 86.88% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 86.66% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.28% 99.17%
CHEMBL1951 P21397 Monoamine oxidase A 83.35% 91.49%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.15% 96.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.52% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.11% 94.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 81.26% 83.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.01% 90.71%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.80% 96.95%
CHEMBL3788 O00444 Serine/threonine-protein kinase PLK4 80.69% 83.65%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 80.25% 96.67%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.12% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 155839
LOTUS LTS0158972
wikiData Q105104178