Subcordatolide D

Details

Top
Internal ID eec3e229-bb38-40d0-b50e-813ddc4247c6
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Sesquiterpene lactones > Germacranolides and derivatives
IUPAC Name [(3aS,4R,5Z,9R,10Z,11aR)-9-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-3a,4,7,8,9,11a-hexahydrocyclodeca[b]furan-4-yl] 2-methylpropanoate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H26O5/c1-10(2)18(21)23-15-8-11(3)6-7-14(20)12(4)9-16-17(15)13(5)19(22)24-16/h8-10,14-17,20H,5-7H2,1-4H3/b11-8-,12-9-/t14-,15-,16-,17+/m1/s1
InChI Key BPKBYWVAKYZQRG-NSMXUSDQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C19H26O5
Molecular Weight 334.40 g/mol
Exact Mass 334.17802393 g/mol
Topological Polar Surface Area (TPSA) 72.80 Ų
XlogP 1.50
Atomic LogP (AlogP) 2.70
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

Top
111625-64-0
[(3aS,4R,5Z,9R,10Z,11aR)-9-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-3a,4,7,8,9,11a-hexahydrocyclodeca[b]furan-4-yl] 2-methylpropanoate
Propanoic acid, 2-methyl-, 2,3,3a,4,7,8,9,11a-octahydro-9-hydroxy-6,10-dimethyl-3-methylene-2-oxocyclodeca(b)furan-4-yl ester, (3aS-(3aR*,4S*,5E,9S*,10Z,11aS*))-
((3aS,4R,5Z,9R,10Z,11aR)-9-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-3a,4,7,8,9,11a-hexahydrocyclodeca(b)furan-4-yl) 2-methylpropanoate
(3AS,4S,9S,11as)-9-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-2H,3H,3ah,4H,7H,8H,9H,11ah-cyclodeca(b)furan-4-yl 2-methylpropanoic acid
(3AS,4S,9S,11as)-9-hydroxy-6,10-dimethyl-3-methylidene-2-oxo-2H,3H,3ah,4H,7H,8H,9H,11ah-cyclodeca[b]furan-4-yl 2-methylpropanoic acid
RefChem:186209
11625-64-0

2D Structure

Top
2D Structure of Subcordatolide D

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9900 99.00%
Caco-2 + 0.7836 78.36%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.6399 63.99%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9162 91.62%
OATP1B3 inhibitior + 0.8269 82.69%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.8198 81.98%
P-glycoprotein inhibitior - 0.6659 66.59%
P-glycoprotein substrate - 0.8494 84.94%
CYP3A4 substrate + 0.5909 59.09%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8823 88.23%
CYP3A4 inhibition - 0.5993 59.93%
CYP2C9 inhibition - 0.8047 80.47%
CYP2C19 inhibition - 0.8464 84.64%
CYP2D6 inhibition - 0.9371 93.71%
CYP1A2 inhibition - 0.5561 55.61%
CYP2C8 inhibition - 0.7836 78.36%
CYP inhibitory promiscuity - 0.9520 95.20%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6080 60.80%
Eye corrosion - 0.9670 96.70%
Eye irritation - 0.8690 86.90%
Skin irritation - 0.5508 55.08%
Skin corrosion - 0.8707 87.07%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4841 48.41%
Micronuclear - 0.8300 83.00%
Hepatotoxicity + 0.6416 64.16%
skin sensitisation - 0.7237 72.37%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.6667 66.67%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity - 0.6110 61.10%
Acute Oral Toxicity (c) III 0.4083 40.83%
Estrogen receptor binding + 0.6579 65.79%
Androgen receptor binding - 0.5545 55.45%
Thyroid receptor binding - 0.5605 56.05%
Glucocorticoid receptor binding + 0.6621 66.21%
Aromatase binding - 0.5642 56.42%
PPAR gamma - 0.5392 53.92%
Honey bee toxicity - 0.7484 74.84%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9642 96.42%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.92% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.14% 91.11%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 89.22% 96.47%
CHEMBL221 P23219 Cyclooxygenase-1 88.93% 90.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.72% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.19% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.86% 99.23%
CHEMBL2581 P07339 Cathepsin D 86.84% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.92% 97.09%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 84.76% 93.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.19% 95.89%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.55% 97.25%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.11% 86.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 81.89% 96.09%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calea subcordata

Cross-Links

Top
PubChem 6442792
LOTUS LTS0130277
wikiData Q105377932