Streptobactin

Details

Top
Internal ID c299a607-0b9b-4f26-a707-2664aee36b75
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name N-[(2S)-1-[[(2R,3S,6R,7S,10R,11S)-7,11-bis[[(2S)-5-(diaminomethylideneamino)-2-[(2,3-dihydroxybenzoyl)amino]pentanoyl]amino]-2,6,10-trimethyl-4,8,12-trioxo-1,5,9-trioxacyclododec-3-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]-2,3-dihydroxybenzamide
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C51H69N15O18/c1-22-34(64-43(76)28(13-7-19-58-49(52)53)61-40(73)25-10-4-16-31(67)37(25)70)46(79)83-24(3)36(66-45(78)30(15-9-21-60-51(56)57)63-42(75)27-12-6-18-33(69)39(27)72)48(81)84-23(2)35(47(80)82-22)65-44(77)29(14-8-20-59-50(54)55)62-41(74)26-11-5-17-32(68)38(26)71/h4-6,10-12,16-18,22-24,28-30,34-36,67-72H,7-9,13-15,19-21H2,1-3H3,(H,61,73)(H,62,74)(H,63,75)(H,64,76)(H,65,77)(H,66,78)(H4,52,53,58)(H4,54,55,59)(H4,56,57,60)/t22-,23-,24-,28+,29+,30+,34+,35+,36+/m1/s1
InChI Key WLSGYSOOUFLHHA-XKCQZYHGSA-N
Popularity 3 references in papers

Physical and Chemical Properties

Top
Molecular Formula C51H69N15O18
Molecular Weight 1180.20 g/mol
Exact Mass 1179.49450041 g/mol
Topological Polar Surface Area (TPSA) 568.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -3.96
H-Bond Acceptor 21
H-Bond Donor 18
Rotatable Bonds 24

Synonyms

Top
CHEBI:68885
Q27137240

2D Structure

Top
2D Structure of Streptobactin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7565 75.65%
Caco-2 - 0.8607 86.07%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Nucleus 0.4637 46.37%
OATP2B1 inhibitior - 0.7196 71.96%
OATP1B1 inhibitior + 0.8931 89.31%
OATP1B3 inhibitior + 0.9347 93.47%
MATE1 inhibitior - 0.5600 56.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.7685 76.85%
P-glycoprotein inhibitior + 0.7440 74.40%
P-glycoprotein substrate + 0.8173 81.73%
CYP3A4 substrate + 0.6174 61.74%
CYP2C9 substrate + 0.5981 59.81%
CYP2D6 substrate - 0.8560 85.60%
CYP3A4 inhibition - 0.5601 56.01%
CYP2C9 inhibition - 0.8689 86.89%
CYP2C19 inhibition - 0.8195 81.95%
CYP2D6 inhibition - 0.9048 90.48%
CYP1A2 inhibition - 0.8518 85.18%
CYP2C8 inhibition - 0.8372 83.72%
CYP inhibitory promiscuity - 0.9358 93.58%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.6300 63.00%
Eye corrosion - 0.9866 98.66%
Eye irritation - 0.8981 89.81%
Skin irritation - 0.7809 78.09%
Skin corrosion - 0.9328 93.28%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4500 45.00%
Micronuclear + 0.7000 70.00%
Hepatotoxicity - 0.5375 53.75%
skin sensitisation - 0.8483 84.83%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity + 0.5838 58.38%
Acute Oral Toxicity (c) III 0.6306 63.06%
Estrogen receptor binding + 0.7494 74.94%
Androgen receptor binding + 0.7369 73.69%
Thyroid receptor binding + 0.6505 65.05%
Glucocorticoid receptor binding + 0.6413 64.13%
Aromatase binding + 0.6797 67.97%
PPAR gamma + 0.7646 76.46%
Honey bee toxicity - 0.8913 89.13%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.6568 65.68%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.85% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.10% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.32% 98.95%
CHEMBL3359 P21462 Formyl peptide receptor 1 93.07% 93.56%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.74% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.83% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 87.08% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.67% 99.23%
CHEMBL259 P32245 Melanocortin receptor 4 84.30% 95.38%
CHEMBL3891 P07384 Calpain 1 83.43% 93.04%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.99% 90.71%
CHEMBL4072 P07858 Cathepsin B 81.93% 93.67%
CHEMBL2535 P11166 Glucose transporter 81.87% 98.75%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 81.78% 83.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.75% 94.45%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 80.23% 82.86%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 70698137
LOTUS LTS0174696
wikiData Q27137240