Stemodin

Details

Top
Internal ID 03fa83d0-ee13-4cc0-88bd-9fe9fa75b940
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Aphidicolane and stemodane diterpenoids
IUPAC Name (1R,2S,4S,7S,10S,12S,13S)-2,6,6,13-tetramethyltetracyclo[10.3.1.01,10.02,7]hexadecane-4,13-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H34O2/c1-17(2)11-15(21)12-18(3)16(17)6-5-13-9-14-10-20(13,18)8-7-19(14,4)22/h13-16,21-22H,5-12H2,1-4H3/t13-,14-,15-,16-,18-,19-,20+/m0/s1
InChI Key GGWGQPNTGAIJMS-IMDGIPCPSA-N
Popularity 11 references in papers

Physical and Chemical Properties

Top
Molecular Formula C20H34O2
Molecular Weight 306.50 g/mol
Exact Mass 306.255880323 g/mol
Topological Polar Surface Area (TPSA) 40.50 Ų
XlogP 4.20
Atomic LogP (AlogP) 4.14
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

Top
41943-79-7
(1R,2S,4S,7S,10S,12S,13S)-2,6,6,13-tetramethyltetracyclo[10.3.1.01,10.02,7]hexadecane-4,13-diol
(1R,2S,4S,7S,10S,12S,13S)-2,6,6,13-tetramethyltetracyclo(10.3.1.01,10.02,7)hexadecane-4,13-diol
RefChem:185497
CHEMBL485073
9,15-Cyclo-C,18-dinor-14,15-secoandrostane-2,17-diol, 4,4,17-trimethyl-, (2alpha,5alpha,9beta,13alpha,17beta)-

2D Structure

Top
2D Structure of Stemodin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 1.0000 100.00%
Caco-2 + 0.5956 59.56%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.4846 48.46%
OATP2B1 inhibitior - 0.8538 85.38%
OATP1B1 inhibitior + 0.8985 89.85%
OATP1B3 inhibitior + 0.9492 94.92%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.8790 87.90%
P-glycoprotein inhibitior - 0.8954 89.54%
P-glycoprotein substrate - 0.7457 74.57%
CYP3A4 substrate + 0.6438 64.38%
CYP2C9 substrate + 0.6107 61.07%
CYP2D6 substrate - 0.7341 73.41%
CYP3A4 inhibition - 0.9357 93.57%
CYP2C9 inhibition - 0.8356 83.56%
CYP2C19 inhibition - 0.8772 87.72%
CYP2D6 inhibition - 0.9591 95.91%
CYP1A2 inhibition - 0.5908 59.08%
CYP2C8 inhibition - 0.6621 66.21%
CYP inhibitory promiscuity - 0.9449 94.49%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8200 82.00%
Carcinogenicity (trinary) Non-required 0.6419 64.19%
Eye corrosion - 0.9689 96.89%
Eye irritation - 0.5884 58.84%
Skin irritation - 0.5933 59.33%
Skin corrosion - 0.9506 95.06%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6398 63.98%
Micronuclear - 0.9900 99.00%
Hepatotoxicity - 0.6628 66.28%
skin sensitisation + 0.5338 53.38%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.7712 77.12%
Acute Oral Toxicity (c) III 0.7466 74.66%
Estrogen receptor binding + 0.8458 84.58%
Androgen receptor binding - 0.5461 54.61%
Thyroid receptor binding + 0.5933 59.33%
Glucocorticoid receptor binding + 0.7274 72.74%
Aromatase binding + 0.7169 71.69%
PPAR gamma - 0.6677 66.77%
Honey bee toxicity - 0.7901 79.01%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.6866 68.66%
Fish aquatic toxicity + 0.9059 90.59%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.52% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.38% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.29% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.48% 97.09%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 89.79% 96.95%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 89.73% 91.79%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 89.28% 82.69%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.78% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.79% 100.00%
CHEMBL206 P03372 Estrogen receptor alpha 83.71% 97.64%
CHEMBL259 P32245 Melanocortin receptor 4 83.63% 95.38%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 82.90% 95.00%
CHEMBL1937 Q92769 Histone deacetylase 2 82.62% 94.75%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 82.57% 91.83%
CHEMBL301 P24941 Cyclin-dependent kinase 2 81.46% 91.23%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.18% 95.89%
CHEMBL284 P27487 Dipeptidyl peptidase IV 81.17% 95.69%
CHEMBL217 P14416 Dopamine D2 receptor 81.17% 95.62%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 80.92% 92.86%
CHEMBL2996 Q05655 Protein kinase C delta 80.23% 97.79%
CHEMBL4777 P25929 Neuropeptide Y receptor type 1 80.19% 96.67%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Stemodia maritima

Cross-Links

Top
PubChem 11012233
LOTUS LTS0243810
wikiData Q105008342