Stambomycin A

Details

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Internal ID ea93878b-5c3c-4873-a624-28cec2cd7e31
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name (6Z,30Z,42Z,44Z)-50-[(2R,3R,4S,5S,6R)-4-(dimethylamino)-3,5-dihydroxy-6-methyloxan-2-yl]oxy-1,8,10,14,16,20,22,24,27,28,32,34,38,40,46-pentadecahydroxy-5,15,19,31,39,45,47,51-octamethyl-29-(4-methylhexyl)-4,52-dioxabicyclo[46.3.1]dopentaconta-6,30,42,44-tetraen-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C73H133NO22/c1-14-41(2)20-17-22-51-34-44(5)63(86)37-53(76)24-19-27-58(81)46(7)57(80)25-16-15-21-43(4)68(88)48(9)64-39-65(95-72-71(91)67(74(12)13)69(89)50(11)94-72)49(10)73(92,96-64)40-66(87)93-45(6)29-30-54(77)35-52(75)23-18-26-59(82)47(8)60(83)32-28-42(3)62(85)38-56(79)36-55(78)31-33-61(84)70(51)90/h15-16,21,29-30,34,41-42,45-65,67-72,75-86,88-92H,14,17-20,22-28,31-33,35-40H2,1-13H3/b16-15-,30-29-,43-21-,44-34-/t41?,42?,45?,46?,47?,48?,49?,50-,51?,52?,53?,54?,55?,56?,57?,58?,59?,60?,61?,62?,63?,64?,65?,67+,68?,69-,70?,71-,72+,73?/m1/s1
InChI Key SZXUZQODGAKEAQ-IMGUJQJGSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C73H133NO22
Molecular Weight 1376.80 g/mol
Exact Mass 1375.93192487 g/mol
Topological Polar Surface Area (TPSA) 401.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 4.50
H-Bond Acceptor 23
H-Bond Donor 17
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Stambomycin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6406 64.06%
Caco-2 - 0.8613 86.13%
Blood Brain Barrier - 0.8750 87.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4931 49.31%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8052 80.52%
OATP1B3 inhibitior + 0.9200 92.00%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9658 96.58%
P-glycoprotein inhibitior + 0.7425 74.25%
P-glycoprotein substrate + 0.8260 82.60%
CYP3A4 substrate + 0.7591 75.91%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8497 84.97%
CYP3A4 inhibition - 0.8600 86.00%
CYP2C9 inhibition - 0.8463 84.63%
CYP2C19 inhibition - 0.8304 83.04%
CYP2D6 inhibition - 0.8952 89.52%
CYP1A2 inhibition - 0.8522 85.22%
CYP2C8 inhibition + 0.8230 82.30%
CYP inhibitory promiscuity - 0.9440 94.40%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5454 54.54%
Eye corrosion - 0.9855 98.55%
Eye irritation - 0.8973 89.73%
Skin irritation - 0.7348 73.48%
Skin corrosion - 0.9212 92.12%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7841 78.41%
Micronuclear + 0.6100 61.00%
Hepatotoxicity + 0.5625 56.25%
skin sensitisation - 0.8529 85.29%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.7397 73.97%
Acute Oral Toxicity (c) III 0.6996 69.96%
Estrogen receptor binding + 0.7945 79.45%
Androgen receptor binding + 0.7109 71.09%
Thyroid receptor binding + 0.6822 68.22%
Glucocorticoid receptor binding + 0.8096 80.96%
Aromatase binding + 0.6036 60.36%
PPAR gamma + 0.8342 83.42%
Honey bee toxicity - 0.6227 62.27%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9074 90.74%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 99.24% 96.77%
CHEMBL226 P30542 Adenosine A1 receptor 96.96% 95.93%
CHEMBL2581 P07339 Cathepsin D 95.57% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.51% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.45% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.86% 91.11%
CHEMBL3359 P21462 Formyl peptide receptor 1 92.93% 93.56%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 92.91% 96.38%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.86% 97.09%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 92.84% 98.75%
CHEMBL3837 P07711 Cathepsin L 92.48% 96.61%
CHEMBL3401 O75469 Pregnane X receptor 91.59% 94.73%
CHEMBL240 Q12809 HERG 91.09% 89.76%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.04% 94.45%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 89.06% 96.90%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.62% 90.08%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.41% 95.89%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 87.65% 91.07%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 87.24% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.60% 95.89%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.41% 93.03%
CHEMBL1871 P10275 Androgen Receptor 85.22% 96.43%
CHEMBL2664 P23526 Adenosylhomocysteinase 84.71% 86.67%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.84% 100.00%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 83.82% 95.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 83.36% 91.03%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.23% 86.33%
CHEMBL4835 P00338 L-lactate dehydrogenase A chain 83.20% 95.34%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.17% 96.47%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.47% 96.61%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.03% 97.25%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 81.81% 95.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.27% 89.00%
CHEMBL2959 Q08881 Tyrosine-protein kinase ITK/TSK 81.26% 95.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.02% 96.37%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.96% 96.21%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.96% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.71% 94.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.38% 92.62%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.31% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 102365381
LOTUS LTS0223871
wikiData Q105264480