Spongidine B

Details

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Internal ID 6a0ab343-b1b6-4fe9-ae7d-bba0a9a653ef
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name 2-[(4bR,7S,10aR)-7-(acetyloxymethyl)-4b,7,10a-trimethyl-6,6a,8,9,10,10b,11,12-octahydro-5H-naphtho[2,1-f]isoquinolin-2-ium-2-yl]acetic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H35NO4/c1-17(27)30-16-23(2)10-5-11-25(4)20(23)8-12-24(3)19-9-13-26(15-22(28)29)14-18(19)6-7-21(24)25/h9,13-14,20-21H,5-8,10-12,15-16H2,1-4H3/p+1/t20?,21?,23-,24+,25+/m1/s1
InChI Key BNRAADDMBWUNTC-FGEGPAHUSA-O
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H36NO4+
Molecular Weight 414.60 g/mol
Exact Mass 414.26443363 g/mol
Topological Polar Surface Area (TPSA) 67.50 Ų
XlogP 5.60
Atomic LogP (AlogP) 4.05
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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CHEMBL495870

2D Structure

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2D Structure of Spongidine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5782 57.82%
Caco-2 - 0.5694 56.94%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7116 71.16%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8544 85.44%
OATP1B3 inhibitior + 0.9411 94.11%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.9618 96.18%
P-glycoprotein inhibitior + 0.6346 63.46%
P-glycoprotein substrate - 0.6546 65.46%
CYP3A4 substrate + 0.6644 66.44%
CYP2C9 substrate - 0.6095 60.95%
CYP2D6 substrate - 0.8689 86.89%
CYP3A4 inhibition + 0.6506 65.06%
CYP2C9 inhibition - 0.7449 74.49%
CYP2C19 inhibition - 0.6594 65.94%
CYP2D6 inhibition - 0.6674 66.74%
CYP1A2 inhibition - 0.7599 75.99%
CYP2C8 inhibition + 0.6180 61.80%
CYP inhibitory promiscuity - 0.6449 64.49%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.6264 62.64%
Eye corrosion - 0.9854 98.54%
Eye irritation - 0.9735 97.35%
Skin irritation - 0.7880 78.80%
Skin corrosion - 0.9395 93.95%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6644 66.44%
Micronuclear - 0.6800 68.00%
Hepatotoxicity - 0.7196 71.96%
skin sensitisation - 0.8524 85.24%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.9244 92.44%
Acute Oral Toxicity (c) III 0.6566 65.66%
Estrogen receptor binding + 0.7474 74.74%
Androgen receptor binding + 0.6607 66.07%
Thyroid receptor binding + 0.6043 60.43%
Glucocorticoid receptor binding + 0.6914 69.14%
Aromatase binding + 0.7178 71.78%
PPAR gamma + 0.5993 59.93%
Honey bee toxicity - 0.8171 81.71%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.8704 87.04%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.26% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.98% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.64% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.47% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.82% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.29% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.53% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.92% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.89% 97.25%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.38% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 84.42% 91.19%
CHEMBL5028 O14672 ADAM10 84.36% 97.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.29% 100.00%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 83.21% 94.62%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.46% 95.50%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.20% 96.38%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.20% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 10364421
LOTUS LTS0060675
wikiData Q104938975