Sphaericin

Details

Top
Internal ID 7ac7b8f6-5a1b-4c2f-8a54-aec8c58f0aa5
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Cyclic peptides
IUPAC Name (2S,3R)-2-[[1-[(2S)-2-[[(2R)-2-[[(2S)-2-[[2-[[(2S)-2-[[1-[(2S)-2-[[(3S,11R,14S,17R,20S,26S)-14,26-bis[(2R)-butan-2-yl]-17,20-bis(1H-indol-3-ylmethyl)-3-(2-methylpropyl)-2,5,8,13,16,19,22,25,28-nonaoxo-1,4,7,12,15,18,21,24,27-nonazabicyclo[27.3.0]dotriacontane-11-carbonyl]amino]-5-carbamimidamidopentanoyl]pyrrolidine-2-carbonyl]amino]-3-hydroxypropanoyl]amino]acetyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-phenylpropanoyl]pyrrolidine-2-carbonyl]amino]-3-methylpentanoic acid
SMILES (Canonical) CCC(C)C1C(=O)NCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(CCC(=O)NCC(=O)NC(C(=O)N2CCCC2C(=O)N1)CC(C)C)C(=O)NC(CCCNC(=N)N)C(=O)N3CCCC3C(=O)NC(CO)C(=O)NCC(=O)NC(CC4=CNC5=CC=CC=C54)C(=O)NC(CC6=CC=C(C=C6)O)C(=O)NC(CC7=CC=CC=C7)C(=O)N8CCCC8C(=O)NC(C(C)CC)C(=O)O)C(C)CC)CC9=CNC1=CC=CC=C19)CC1=CNC2=CC=CC=C21
SMILES (Isomeric) CC[C@@H](C)[C@H]1C(=O)N[C@H](CCC(=O)NCC(=O)N[C@H](C(=O)N2CCCC2C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@@H](C(=O)N1)CC3=CNC4=CC=CC=C43)CC5=CNC6=CC=CC=C65)[C@H](C)CC)CC(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N7CCCC7C(=O)N[C@@H](CO)C(=O)NCC(=O)N[C@@H](CC8=CNC9=CC=CC=C98)C(=O)N[C@H](CC1=CC=C(C=C1)O)C(=O)N[C@@H](CC1=CC=CC=C1)C(=O)N1CCCC1C(=O)N[C@@H]([C@H](C)CC)C(=O)O
InChI InChI=1S/C110H146N24O22/c1-9-61(6)92-104(150)119-58-91(140)121-80(51-67-54-115-74-31-19-16-28-71(67)74)99(145)126-81(52-68-55-116-75-32-20-17-29-72(68)75)100(146)129-93(62(7)10-2)105(151)123-76(41-42-88(137)117-56-89(138)122-82(47-60(4)5)107(153)133-45-23-35-86(133)102(148)130-92)96(142)124-77(33-21-43-113-110(111)112)106(152)132-44-22-34-85(132)101(147)128-84(59-135)95(141)118-57-90(139)120-79(50-66-53-114-73-30-18-15-27-70(66)73)98(144)125-78(48-65-37-39-69(136)40-38-65)97(143)127-83(49-64-25-13-12-14-26-64)108(154)134-46-24-36-87(134)103(149)131-94(109(155)156)63(8)11-3/h12-20,25-32,37-40,53-55,60-63,76-87,92-94,114-116,135-136H,9-11,21-24,33-36,41-52,56-59H2,1-8H3,(H,117,137)(H,118,141)(H,119,150)(H,120,139)(H,121,140)(H,122,138)(H,123,151)(H,124,142)(H,125,144)(H,126,145)(H,127,143)(H,128,147)(H,129,146)(H,130,148)(H,131,149)(H,155,156)(H4,111,112,113)/t61-,62-,63-,76-,77+,78-,79+,80+,81-,82+,83+,84+,85?,86?,87?,92+,93+,94+/m1/s1
InChI Key LWGFCRLDHIFNQK-OTDJLLNESA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C110H146N24O22
Molecular Weight 2156.50 g/mol
Exact Mass 2156.10770722 g/mol
Topological Polar Surface Area (TPSA) 685.00 Ų
XlogP 6.00
Atomic LogP (AlogP) 0.81
H-Bond Acceptor 22
H-Bond Donor 24
Rotatable Bonds 40

Synonyms

Top
RefChem:184620
(2S,3R)-2-(((1-((2S)-2-(((2R)-2-(((2S)-2-((2-(((2S)-2-(((1-((2S)-2-((((3S,11R,14S,17R,20S,26S)-14,26-bis((2R)-butan-2-yl)-5,8,13,16,19,22,25,28-octahydroxy-17,20-bis(1H-indol-3-ylmethyl)-3-(2-methylpropyl)-2-oxo-1,4,7,12,15,18,21,24,27-nonazabicyclo(27.3.0)dotriaconta-4,7,12,15,18,21,24,27-octaen-11-yl)-hydroxymethylidene)amino)-5-carbamimidamidopentanoyl)pyrrolidin-2-yl)-hydroxymethylidene)amino)-1,3-dihydroxypropylidene)amino)-1-hydroxyethylidene)amino)-1-hydroxy-3-(1H-indol-3-yl)propylidene)amino)-1-hydroxy-3-(4-hydroxyphenyl)propylidene)amino)-3-phenylpropanoyl)pyrrolidin-2-yl)-hydroxymethylidene)amino)-3-methylpentanoic acid
(2S,3R)-2-((1-((2S)-2-(((2R)-2-(((2S)-2-((2-(((2S)-2-((1-((2S)-2-(((3S,11R,14S,17R,20S,26S)-14,26-bis((2R)-butan-2-yl)-17,20-bis(1H-indol-3-ylmethyl)-3-(2-methylpropyl)-2,5,8,13,16,19,22,25,28-nonaoxo-1,4,7,12,15,18,21,24,27-nonazabicyclo(27.3.0)dotriacontane-11-carbonyl)amino)-5-carbamimidamidopentanoyl)pyrrolidine-2-carbonyl)amino)-3-hydroxypropanoyl)amino)acetyl)amino)-3-(1H-indol-3-yl)propanoyl)amino)-3-(4-hydroxyphenyl)propanoyl)amino)-3-phenylpropanoyl)pyrrolidine-2-carbonyl)amino)-3-methylpentanoic acid
(2S,3R)-2-[[[1-[(2S)-2-[[(2R)-2-[[(2S)-2-[[2-[[(2S)-2-[[[1-[(2S)-2-[[[(3S,11R,14S,17R,20S,26S)-14,26-bis[(2R)-butan-2-yl]-5,8,13,16,19,22,25,28-octahydroxy-17,20-bis(1H-indol-3-ylmethyl)-3-(2-methylpropyl)-2-oxo-1,4,7,12,15,18,21,24,27-nonazabicyclo[27.3.0]dotriaconta-4,7,12,15,18,21,24,27-octaen-11-yl]-hydroxymethylidene]amino]-5-carbamimidamidopentanoyl]pyrrolidin-2-yl]-hydroxymethylidene]amino]-1,3-dihydroxypropylidene]amino]-1-hydroxyethylidene]amino]-1-hydroxy-3-(1H-indol-3-yl)propylidene]amino]-1-hydroxy-3-(4-hydroxyphenyl)propylidene]amino]-3-phenylpropanoyl]pyrrolidin-2-yl]-hydroxymethylidene]amino]-3-methylpentanoic acid
(2S,3R)-2-[[1-[(2S)-2-[[(2R)-2-[[(2S)-2-[[2-[[(2S)-2-[[1-[(2S)-2-[[(3S,11R,14S,17R,20S,26S)-14,26-bis[(2R)-butan-2-yl]-17,20-bis(1H-indol-3-ylmethyl)-3-(2-methylpropyl)-2,5,8,13,16,19,22,25,28-nonaoxo-1,4,7,12,15,18,21,24,27-nonazabicyclo[27.3.0]dotriacontane-11-carbonyl]amino]-5-carbamimidamidopentanoyl]pyrrolidine-2-carbonyl]amino]-3-hydroxypropanoyl]amino]acetyl]amino]-3-(1H-indol-3-yl)propanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-phenylpropanoyl]pyrrolidine-2-carbonyl]amino]-3-methylpentanoic acid
SCHEMBL30772341
CHEBI:218749

2D Structure

Top
2D Structure of Sphaericin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9351 93.51%
Caco-2 - 0.8607 86.07%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4269 42.69%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8122 81.22%
OATP1B3 inhibitior + 0.9330 93.30%
MATE1 inhibitior - 0.7447 74.47%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior + 0.9746 97.46%
P-glycoprotein inhibitior + 0.7418 74.18%
P-glycoprotein substrate + 0.8783 87.83%
CYP3A4 substrate + 0.7638 76.38%
CYP2C9 substrate - 0.6032 60.32%
CYP2D6 substrate - 0.8331 83.31%
CYP3A4 inhibition - 0.6452 64.52%
CYP2C9 inhibition - 0.8473 84.73%
CYP2C19 inhibition - 0.8104 81.04%
CYP2D6 inhibition - 0.8915 89.15%
CYP1A2 inhibition - 0.8437 84.37%
CYP2C8 inhibition + 0.8451 84.51%
CYP inhibitory promiscuity - 0.9116 91.16%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.5726 57.26%
Eye corrosion - 0.9856 98.56%
Eye irritation - 0.8952 89.52%
Skin irritation - 0.7810 78.10%
Skin corrosion - 0.9290 92.90%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7241 72.41%
Micronuclear + 0.8600 86.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.8623 86.23%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 1.0000 100.00%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.6483 64.83%
Acute Oral Toxicity (c) III 0.5541 55.41%
Estrogen receptor binding - 0.5812 58.12%
Androgen receptor binding + 0.7174 71.74%
Thyroid receptor binding + 0.8191 81.91%
Glucocorticoid receptor binding + 0.8466 84.66%
Aromatase binding + 0.8251 82.51%
PPAR gamma + 0.7852 78.52%
Honey bee toxicity - 0.6194 61.94%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.8709 87.09%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 100.00% 98.95%
CHEMBL3837 P07711 Cathepsin L 99.89% 96.61%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.76% 91.11%
CHEMBL4777 P25929 Neuropeptide Y receptor type 1 99.66% 96.67%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 99.57% 97.64%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 99.44% 91.81%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.43% 96.09%
CHEMBL333 P08253 Matrix metalloproteinase-2 99.22% 96.31%
CHEMBL1914 P06276 Butyrylcholinesterase 98.99% 95.00%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 98.81% 82.38%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 98.56% 97.23%
CHEMBL2514 O95665 Neurotensin receptor 2 98.39% 100.00%
CHEMBL4588 P22894 Matrix metalloproteinase 8 98.38% 94.66%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 97.75% 98.33%
CHEMBL1255126 O15151 Protein Mdm4 97.66% 90.20%
CHEMBL4040 P28482 MAP kinase ERK2 97.33% 83.82%
CHEMBL4018 P49146 Neuropeptide Y receptor type 2 96.96% 98.94%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.91% 94.45%
CHEMBL3310 Q96DB2 Histone deacetylase 11 96.79% 88.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 96.75% 90.08%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.65% 97.09%
CHEMBL4123 P30989 Neurotensin receptor 1 96.64% 96.67%
CHEMBL4394 Q9NYA1 Sphingosine kinase 1 96.05% 96.03%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 95.90% 97.14%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 95.62% 95.00%
CHEMBL4979 P13866 Sodium/glucose cotransporter 1 95.56% 98.24%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.54% 95.56%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 95.16% 91.71%
CHEMBL2535 P11166 Glucose transporter 94.83% 98.75%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.39% 99.17%
CHEMBL3176 O43603 Galanin receptor 2 94.36% 98.89%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 94.31% 88.42%
CHEMBL4462 Q8IXJ6 NAD-dependent deacetylase sirtuin 2 94.19% 90.24%
CHEMBL5608 Q16288 NT-3 growth factor receptor 93.87% 95.89%
CHEMBL220 P22303 Acetylcholinesterase 93.77% 94.45%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 93.45% 100.00%
CHEMBL4816 Q9Y243 Serine/threonine-protein kinase AKT3 93.43% 96.28%
CHEMBL6175 Q9H3R0 Lysine-specific demethylase 4C 93.16% 96.69%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 93.07% 85.00%
CHEMBL340 P08684 Cytochrome P450 3A4 92.67% 91.19%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.76% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 91.65% 96.90%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 91.58% 95.83%
CHEMBL5701 Q9H2K8 Serine/threonine-protein kinase TAO3 91.40% 96.67%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 91.16% 100.00%
CHEMBL1293287 P14735 Insulin-degrading enzyme 90.81% 88.10%
CHEMBL259 P32245 Melanocortin receptor 4 90.47% 95.38%
CHEMBL4461 Q9NTG7 NAD-dependent deacetylase sirtuin 3 90.47% 94.36%
CHEMBL217 P14416 Dopamine D2 receptor 90.45% 95.62%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 90.10% 96.47%
CHEMBL5896 O75164 Lysine-specific demethylase 4A 90.08% 99.09%
CHEMBL236 P41143 Delta opioid receptor 90.04% 99.35%
CHEMBL206 P03372 Estrogen receptor alpha 89.99% 97.64%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 89.77% 90.71%
CHEMBL261 P00915 Carbonic anhydrase I 89.73% 96.76%
CHEMBL3729 P22748 Carbonic anhydrase IV 89.72% 99.23%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 89.61% 82.86%
CHEMBL321 P14780 Matrix metalloproteinase 9 89.47% 92.12%
CHEMBL3202 P48147 Prolyl endopeptidase 89.28% 90.65%
CHEMBL5261 Q7L7X3 Serine/threonine-protein kinase TAO1 89.20% 89.33%
CHEMBL3192 Q9BY41 Histone deacetylase 8 88.31% 93.99%
CHEMBL3524 P56524 Histone deacetylase 4 87.68% 92.97%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 87.28% 93.00%
CHEMBL1937 Q92769 Histone deacetylase 2 87.23% 94.75%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 86.72% 92.67%
CHEMBL5203 P33316 dUTP pyrophosphatase 86.65% 99.18%
CHEMBL2803 P43403 Tyrosine-protein kinase ZAP-70 86.63% 82.50%
CHEMBL204 P00734 Thrombin 86.57% 96.01%
CHEMBL4644 P41968 Melanocortin receptor 3 85.85% 99.52%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.75% 95.50%
CHEMBL221 P23219 Cyclooxygenase-1 85.54% 90.17%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.49% 95.89%
CHEMBL4361 Q07820 Induced myeloid leukemia cell differentiation protein Mcl-1 85.27% 95.52%
CHEMBL4296 Q15858 Sodium channel protein type IX alpha subunit 85.26% 96.11%
CHEMBL4608 P33032 Melanocortin receptor 5 85.24% 97.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.92% 95.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.75% 99.23%
CHEMBL205 P00918 Carbonic anhydrase II 83.68% 98.44%
CHEMBL3024 P53350 Serine/threonine-protein kinase PLK1 83.62% 97.43%
CHEMBL2821 P00748 Coagulation factor XII 83.56% 96.21%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 83.53% 82.69%
CHEMBL1075317 P61964 WD repeat-containing protein 5 81.48% 96.33%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 145997937
LOTUS LTS0246139
wikiData Q105158266