[(2S,3R,4S,5R)-2-[[(1S,4R,5R,6R,8R,10R,12S,13R,16R,18S,21R)-8-[(1S)-1-acetyloxy-2-hydroxy-2-methylpropyl]-4,6,12,17,17-pentamethyl-11-oxo-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-18-yl]oxy]-4,5-dihydroxyoxan-3-yl] acetate

Details

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Internal ID b5a3bd5e-e65b-446b-ba49-75948856c038
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(2S,3R,4S,5R)-2-[[(1S,4R,5R,6R,8R,10R,12S,13R,16R,18S,21R)-8-[(1S)-1-acetyloxy-2-hydroxy-2-methylpropyl]-4,6,12,17,17-pentamethyl-11-oxo-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-18-yl]oxy]-4,5-dihydroxyoxan-3-yl] acetate
SMILES (Canonical) CC1CC(OC2C1C3(CCC45CC46CCC(C(C6CCC5C3(C2=O)C)(C)C)OC7C(C(C(CO7)O)O)OC(=O)C)C)C(C(C)(C)O)OC(=O)C
SMILES (Isomeric) C[C@@H]1C[C@@H](O[C@@H]2[C@H]1[C@]3(CC[C@@]45C[C@@]46CC[C@@H](C([C@@H]6CC[C@H]5[C@@]3(C2=O)C)(C)C)O[C@H]7[C@@H]([C@H]([C@@H](CO7)O)O)OC(=O)C)C)[C@@H](C(C)(C)O)OC(=O)C
InChI InChI=1S/C39H60O11/c1-19-16-23(32(35(6,7)45)48-21(3)41)49-29-27(19)36(8)14-15-39-18-38(39)13-12-26(50-33-30(47-20(2)40)28(43)22(42)17-46-33)34(4,5)24(38)10-11-25(39)37(36,9)31(29)44/h19,22-30,32-33,42-43,45H,10-18H2,1-9H3/t19-,22-,23-,24+,25+,26+,27+,28+,29-,30-,32+,33+,36-,37-,38-,39+/m1/s1
InChI Key HOEACCWXJIUNFZ-PJDTTXJDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C39H60O11
Molecular Weight 704.90 g/mol
Exact Mass 704.41356273 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 4.11
H-Bond Acceptor 11
H-Bond Donor 3
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5R)-2-[[(1S,4R,5R,6R,8R,10R,12S,13R,16R,18S,21R)-8-[(1S)-1-acetyloxy-2-hydroxy-2-methylpropyl]-4,6,12,17,17-pentamethyl-11-oxo-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docosan-18-yl]oxy]-4,5-dihydroxyoxan-3-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8517 85.17%
Caco-2 - 0.8650 86.50%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.8068 80.68%
OATP2B1 inhibitior - 0.8702 87.02%
OATP1B1 inhibitior + 0.8184 81.84%
OATP1B3 inhibitior + 0.8897 88.97%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.5154 51.54%
P-glycoprotein inhibitior + 0.7892 78.92%
P-glycoprotein substrate + 0.5965 59.65%
CYP3A4 substrate + 0.7334 73.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8858 88.58%
CYP3A4 inhibition - 0.8333 83.33%
CYP2C9 inhibition - 0.8032 80.32%
CYP2C19 inhibition - 0.8742 87.42%
CYP2D6 inhibition - 0.9605 96.05%
CYP1A2 inhibition - 0.8133 81.33%
CYP2C8 inhibition + 0.6644 66.44%
CYP inhibitory promiscuity - 0.9857 98.57%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6567 65.67%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9135 91.35%
Skin irritation - 0.6490 64.90%
Skin corrosion - 0.9306 93.06%
Ames mutagenesis - 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4355 43.55%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.5754 57.54%
skin sensitisation - 0.9030 90.30%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.7150 71.50%
Acute Oral Toxicity (c) I 0.3493 34.93%
Estrogen receptor binding + 0.6562 65.62%
Androgen receptor binding + 0.7285 72.85%
Thyroid receptor binding - 0.5508 55.08%
Glucocorticoid receptor binding + 0.7573 75.73%
Aromatase binding + 0.7178 71.78%
PPAR gamma + 0.7206 72.06%
Honey bee toxicity - 0.6208 62.08%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9567 95.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.29% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.26% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.84% 98.95%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 96.70% 82.69%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.39% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.49% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.46% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.37% 89.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 91.87% 97.14%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 90.36% 98.75%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 90.27% 92.88%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 90.10% 95.71%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 89.89% 91.07%
CHEMBL340 P08684 Cytochrome P450 3A4 89.61% 91.19%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.31% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.27% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.21% 97.09%
CHEMBL5028 O14672 ADAM10 85.74% 97.50%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 84.81% 97.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.88% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.15% 99.23%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.89% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 81.23% 92.50%
CHEMBL204 P00734 Thrombin 80.51% 96.01%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.36% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea vaginata
Dicranopteris linearis

Cross-Links

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PubChem 12096379
NPASS NPC101118
LOTUS LTS0007171
wikiData Q105031218