sn-Glycerol 3-phosphate

Details

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Internal ID 84fe4e5a-7820-4217-85e4-0977d1c74859
Taxonomy Lipids and lipid-like molecules > Glycerophospholipids > Glycerophosphates
IUPAC Name [(2R)-2,3-dihydroxypropyl] dihydrogen phosphate
SMILES (Canonical) C(C(COP(=O)(O)O)O)O
SMILES (Isomeric) C([C@H](COP(=O)(O)O)O)O
InChI InChI=1S/C3H9O6P/c4-1-3(5)2-9-10(6,7)8/h3-5H,1-2H2,(H2,6,7,8)/t3-/m1/s1
InChI Key AWUCVROLDVIAJX-GSVOUGTGSA-N
Popularity 1,182 references in papers

Physical and Chemical Properties

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Molecular Formula C3H9O6P
Molecular Weight 172.07 g/mol
Exact Mass 172.01367500 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -1.55
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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D-Glycerol 1-phosphate
17989-41-2
(R)-glycerol 1-phosphate
sn-Glycero-3-phosphate
sn-glycerol-3-phosphate
Glyceryl 1-phosphate, (R)-
UNII-370V52HE4B
Glycerol monophosphate
Glycerol, 1-(dihydrogen phosphate), d-
370V52HE4B
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of sn-Glycerol 3-phosphate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8190 81.90%
Caco-2 - 0.9285 92.85%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7792 77.92%
OATP2B1 inhibitior - 0.8529 85.29%
OATP1B1 inhibitior + 0.9710 97.10%
OATP1B3 inhibitior + 0.9452 94.52%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9673 96.73%
P-glycoprotein inhibitior - 0.9788 97.88%
P-glycoprotein substrate - 0.9791 97.91%
CYP3A4 substrate - 0.6501 65.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8093 80.93%
CYP3A4 inhibition - 0.9481 94.81%
CYP2C9 inhibition - 0.9136 91.36%
CYP2C19 inhibition - 0.8759 87.59%
CYP2D6 inhibition - 0.9306 93.06%
CYP1A2 inhibition - 0.9107 91.07%
CYP2C8 inhibition - 0.9937 99.37%
CYP inhibitory promiscuity - 0.9696 96.96%
UGT catelyzed + 1.0000 100.00%
Carcinogenicity (binary) - 0.6808 68.08%
Carcinogenicity (trinary) Non-required 0.5671 56.71%
Eye corrosion - 0.5765 57.65%
Eye irritation - 0.8121 81.21%
Skin irritation - 0.7289 72.89%
Skin corrosion - 0.5775 57.75%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6689 66.89%
Micronuclear - 0.5600 56.00%
Hepatotoxicity - 0.5375 53.75%
skin sensitisation - 0.8506 85.06%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity - 0.8111 81.11%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity + 0.5000 50.00%
Acute Oral Toxicity (c) III 0.6297 62.97%
Estrogen receptor binding - 0.6276 62.76%
Androgen receptor binding - 0.7474 74.74%
Thyroid receptor binding - 0.7474 74.74%
Glucocorticoid receptor binding - 0.6289 62.89%
Aromatase binding - 0.7026 70.26%
PPAR gamma - 0.7664 76.64%
Honey bee toxicity + 0.6165 61.65%
Biodegradation + 0.6750 67.50%
Crustacea aquatic toxicity - 0.8700 87.00%
Fish aquatic toxicity - 0.9079 90.79%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 98.48% 97.29%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.76% 96.09%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 90.26% 94.01%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 86.24% 91.71%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.42% 86.92%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.38% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana
Medicago sativa
Vigna radiata

Cross-Links

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PubChem 439162
NPASS NPC266566
LOTUS LTS0124301
wikiData Q27093499