Simarinolide

Details

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Internal ID bfd42164-6b17-4a33-9abb-342d3205e787
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name [(1S,2S,4R,7S,9R,13S,14R,16R,17S)-4-hydroxy-2,6,14,17-tetramethyl-3,11-dioxo-14-[[(3R)-5-oxooxolan-3-yl]methyl]-10-oxatetracyclo[7.7.1.02,7.013,17]heptadec-5-en-16-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H36O8/c1-13-6-17(29)24(32)26(4)16(13)8-20-27(5)19(9-22(31)35-20)25(3,10-15-7-21(30)33-12-15)11-18(23(26)27)34-14(2)28/h6,15-20,23,29H,7-12H2,1-5H3/t15-,16-,17+,18+,19-,20+,23+,25+,26-,27+/m0/s1
InChI Key FKRJRVLYHPYJOF-WJFJEFAESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H36O8
Molecular Weight 488.60 g/mol
Exact Mass 488.24101810 g/mol
Topological Polar Surface Area (TPSA) 116.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 2.75
H-Bond Acceptor 8
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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SIMARINOLIDE
NSC-330502

2D Structure

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2D Structure of Simarinolide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9811 98.11%
Caco-2 - 0.6686 66.86%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8440 84.40%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8151 81.51%
OATP1B3 inhibitior + 0.8771 87.71%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.9295 92.95%
P-glycoprotein inhibitior + 0.7317 73.17%
P-glycoprotein substrate + 0.6826 68.26%
CYP3A4 substrate + 0.7058 70.58%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8584 85.84%
CYP3A4 inhibition - 0.6671 66.71%
CYP2C9 inhibition - 0.9100 91.00%
CYP2C19 inhibition - 0.9302 93.02%
CYP2D6 inhibition - 0.9512 95.12%
CYP1A2 inhibition - 0.8856 88.56%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity - 0.8274 82.74%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5747 57.47%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.9004 90.04%
Skin irritation - 0.5628 56.28%
Skin corrosion - 0.9403 94.03%
Ames mutagenesis + 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4417 44.17%
Micronuclear - 0.6400 64.00%
Hepatotoxicity + 0.5769 57.69%
skin sensitisation - 0.8356 83.56%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity + 0.5385 53.85%
Acute Oral Toxicity (c) III 0.4275 42.75%
Estrogen receptor binding + 0.8146 81.46%
Androgen receptor binding + 0.6564 65.64%
Thyroid receptor binding - 0.5649 56.49%
Glucocorticoid receptor binding + 0.8156 81.56%
Aromatase binding + 0.6790 67.90%
PPAR gamma + 0.7074 70.74%
Honey bee toxicity - 0.7183 71.83%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9896 98.96%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.61% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.36% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.77% 85.14%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 93.64% 96.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.53% 96.09%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 93.08% 97.21%
CHEMBL2581 P07339 Cathepsin D 91.55% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.39% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 89.55% 97.79%
CHEMBL340 P08684 Cytochrome P450 3A4 87.96% 91.19%
CHEMBL3922 P50579 Methionine aminopeptidase 2 85.89% 97.28%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.59% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.51% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.08% 91.07%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.71% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 81.32% 97.25%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.73% 89.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.21% 95.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Samadera indica

Cross-Links

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PubChem 332604
LOTUS LTS0243067
wikiData Q105105205