Silychrystin

Details

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Internal ID 0fef07ea-5def-4183-834e-a7cd5096c7c3
Taxonomy Phenylpropanoids and polyketides > 2-arylbenzofuran flavonoids
IUPAC Name 3,5,7-trihydroxy-2-[7-hydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-(hydroxymethyl)-2,3-dihydro-1-benzofuran-5-yl]-2,3-dihydrochromen-4-one
SMILES (Canonical) COC1=C(C=CC(=C1)C2C(C3=C(O2)C(=CC(=C3)C4C(C(=O)C5=C(C=C(C=C5O4)O)O)O)O)CO)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C2C(C3=C(O2)C(=CC(=C3)C4C(C(=O)C5=C(C=C(C=C5O4)O)O)O)O)CO)O
InChI InChI=1S/C25H22O10/c1-33-18-6-10(2-3-15(18)28)23-14(9-26)13-4-11(5-17(30)25(13)35-23)24-22(32)21(31)20-16(29)7-12(27)8-19(20)34-24/h2-8,14,22-24,26-30,32H,9H2,1H3
InChI Key BMLIIPOXVWESJG-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H22O10
Molecular Weight 482.40 g/mol
Exact Mass 482.12129689 g/mol
Topological Polar Surface Area (TPSA) 166.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 2.40
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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Silymarin II
Silicristin, INN
SCHEMBL10049339
DTXSID60865692
BCP07563
Silychristin;Silicristina;Silicristine
FT-0630575
Q-100411
B0005-464841
3,5,7-Trihydroxy-2-[7-hydroxy-2-(4-hydroxy-3-methoxyphenyl)-3-(hydroxymethyl)-2,3-dihydro-1-benzofuran-5-yl]-2,3-dihydro-4H-1-benzopyran-4-one

2D Structure

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2D Structure of Silychrystin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9414 94.14%
Caco-2 - 0.8515 85.15%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7427 74.27%
OATP2B1 inhibitior + 0.5770 57.70%
OATP1B1 inhibitior + 0.9107 91.07%
OATP1B3 inhibitior + 0.8999 89.99%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8948 89.48%
P-glycoprotein inhibitior + 0.8126 81.26%
P-glycoprotein substrate - 0.7171 71.71%
CYP3A4 substrate + 0.6335 63.35%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8055 80.55%
CYP3A4 inhibition + 0.6919 69.19%
CYP2C9 inhibition + 0.8175 81.75%
CYP2C19 inhibition + 0.6838 68.38%
CYP2D6 inhibition - 0.7995 79.95%
CYP1A2 inhibition - 0.5711 57.11%
CYP2C8 inhibition + 0.7290 72.90%
CYP inhibitory promiscuity + 0.9131 91.31%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5899 58.99%
Eye corrosion - 0.9846 98.46%
Eye irritation - 0.7766 77.66%
Skin irritation - 0.7633 76.33%
Skin corrosion - 0.9505 95.05%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4324 43.24%
Micronuclear + 0.7400 74.00%
Hepatotoxicity + 0.8000 80.00%
skin sensitisation - 0.8410 84.10%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.6994 69.94%
Acute Oral Toxicity (c) III 0.7241 72.41%
Estrogen receptor binding + 0.8376 83.76%
Androgen receptor binding + 0.6874 68.74%
Thyroid receptor binding + 0.6505 65.05%
Glucocorticoid receptor binding + 0.8086 80.86%
Aromatase binding - 0.5445 54.45%
PPAR gamma + 0.6356 63.56%
Honey bee toxicity - 0.7950 79.50%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.7243 72.43%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.82% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.28% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.02% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.84% 95.56%
CHEMBL2581 P07339 Cathepsin D 92.21% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.86% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.87% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.65% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.48% 89.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.24% 86.92%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.85% 99.15%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.79% 97.09%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.71% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 84.58% 94.73%
CHEMBL2535 P11166 Glucose transporter 84.18% 98.75%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.89% 94.00%
CHEMBL3194 P02766 Transthyretin 83.74% 90.71%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.95% 92.62%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.20% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Anastatica hierochuntica
Silybum marianum

Cross-Links

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PubChem 4481797
NPASS NPC56229
LOTUS LTS0108239
wikiData Q104938448