Shengjimycin D

Details

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Internal ID 12dadce0-7c68-4e64-b8f0-c0d99e4261aa
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Aminosaccharides > Aminoglycosides
IUPAC Name [(11Z,13Z)-6-[5-(5-acetyloxy-4-hydroxy-4,6-dimethyloxan-2-yl)oxy-4-(dimethylamino)-3-hydroxy-6-methyloxan-2-yl]oxy-10-[5-(dimethylamino)-6-methyloxan-2-yl]oxy-5-methoxy-9,16-dimethyl-2-oxo-7-(2-oxoethyl)-1-oxacyclohexadeca-11,13-dien-4-yl] acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C47H78N2O16/c1-26-23-33(21-22-50)43(65-46-41(54)40(49(11)12)42(29(4)60-46)64-39-25-47(8,55)45(30(5)59-39)62-32(7)52)44(56-13)36(61-31(6)51)24-37(53)57-27(2)17-15-14-16-18-35(26)63-38-20-19-34(48(9)10)28(3)58-38/h14-16,18,22,26-30,33-36,38-46,54-55H,17,19-21,23-25H2,1-13H3/b15-14-,18-16-
InChI Key UEWVJVSNLOFCHN-JNDPSPENSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C47H78N2O16
Molecular Weight 927.10 g/mol
Exact Mass 926.53513440 g/mol
Topological Polar Surface Area (TPSA) 208.00 Ų
XlogP 3.30
Atomic LogP (AlogP) 3.47
H-Bond Acceptor 18
H-Bond Donor 2
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Shengjimycin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5787 57.87%
Caco-2 - 0.8599 85.99%
Blood Brain Barrier - 0.9000 90.00%
Human oral bioavailability - 0.9429 94.29%
Subcellular localzation Mitochondria 0.5998 59.98%
OATP2B1 inhibitior - 0.7306 73.06%
OATP1B1 inhibitior + 0.8891 88.91%
OATP1B3 inhibitior + 0.9452 94.52%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9679 96.79%
P-glycoprotein inhibitior + 0.7704 77.04%
P-glycoprotein substrate + 0.8155 81.55%
CYP3A4 substrate + 0.6584 65.84%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8853 88.53%
CYP3A4 inhibition - 0.8505 85.05%
CYP2C9 inhibition - 0.9107 91.07%
CYP2C19 inhibition - 0.8950 89.50%
CYP2D6 inhibition - 0.9162 91.62%
CYP1A2 inhibition - 0.9281 92.81%
CYP2C8 inhibition + 0.6968 69.68%
CYP inhibitory promiscuity - 0.9753 97.53%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5376 53.76%
Eye corrosion - 0.9855 98.55%
Eye irritation - 0.9077 90.77%
Skin irritation - 0.7522 75.22%
Skin corrosion - 0.9106 91.06%
Ames mutagenesis - 0.6870 68.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7396 73.96%
Micronuclear + 0.6600 66.00%
Hepatotoxicity + 0.6961 69.61%
skin sensitisation - 0.8675 86.75%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6462 64.62%
Acute Oral Toxicity (c) III 0.4689 46.89%
Estrogen receptor binding - 0.5478 54.78%
Androgen receptor binding + 0.6719 67.19%
Thyroid receptor binding + 0.5565 55.65%
Glucocorticoid receptor binding + 0.6859 68.59%
Aromatase binding - 0.6937 69.37%
PPAR gamma + 0.7968 79.68%
Honey bee toxicity - 0.5241 52.41%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.7300 73.00%
Fish aquatic toxicity - 0.3616 36.16%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.40% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.77% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.42% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.85% 95.56%
CHEMBL340 P08684 Cytochrome P450 3A4 93.76% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.65% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.56% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.36% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.30% 92.94%
CHEMBL204 P00734 Thrombin 90.13% 96.01%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.29% 99.17%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.21% 100.00%
CHEMBL3922 P50579 Methionine aminopeptidase 2 88.16% 97.28%
CHEMBL1974 P36888 Tyrosine-protein kinase receptor FLT3 87.97% 91.83%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.22% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.85% 97.25%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.50% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.29% 94.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.29% 91.07%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.08% 96.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.15% 91.24%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.34% 97.36%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 80.16% 97.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 5353380
LOTUS LTS0165458
wikiData Q105271186