Serpentine, hydrochloride

Details

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Internal ID 8cb884b5-dcbe-4e78-a9f9-05c84f4b0a5e
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Pyridoindoles > Beta carbolines
IUPAC Name methyl 16-methyl-17-oxa-3-aza-13-azoniapentacyclo[11.8.0.02,10.04,9.015,20]henicosa-1(13),2(10),4,6,8,11,18-heptaene-19-carboxylate;chloride
SMILES (Canonical) CC1C2C[N+]3=C(CC2C(=CO1)C(=O)OC)C4=C(C=C3)C5=CC=CC=C5N4.[Cl-]
SMILES (Isomeric) CC1C2C[N+]3=C(CC2C(=CO1)C(=O)OC)C4=C(C=C3)C5=CC=CC=C5N4.[Cl-]
InChI InChI=1S/C21H20N2O3.ClH/c1-12-16-10-23-8-7-14-13-5-3-4-6-18(13)22-20(14)19(23)9-15(16)17(11-26-12)21(24)25-2;/h3-8,11-12,15-16H,9-10H2,1-2H3;1H
InChI Key HKPNHORYVYLABA-UHFFFAOYSA-N
Popularity 27 references in papers

Physical and Chemical Properties

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Molecular Formula C21H21ClN2O3
Molecular Weight 384.90 g/mol
Exact Mass 384.1240702 g/mol
Topological Polar Surface Area (TPSA) 55.20 Ų
XlogP 0.00
Atomic LogP (AlogP) -0.12
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 1

Synonyms

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Serpentine, hydrochloride
Serpentine
Methyl 16-methyl-17-oxa-3-aza-13-azoniapentacyclo[11.8.0.02,10.04,9.015,20]henicosa-1(13),2(10),4,6,8,11,18-heptaene-19-carboxylate;chloride
NSC-15626

2D Structure

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2D Structure of Serpentine, hydrochloride

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9717 97.17%
Caco-2 + 0.7838 78.38%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Lysosomes 0.4375 43.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8666 86.66%
OATP1B3 inhibitior + 0.9346 93.46%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8777 87.77%
P-glycoprotein inhibitior + 0.6813 68.13%
P-glycoprotein substrate + 0.5999 59.99%
CYP3A4 substrate + 0.6740 67.40%
CYP2C9 substrate - 0.7987 79.87%
CYP2D6 substrate - 0.8587 85.87%
CYP3A4 inhibition + 0.5809 58.09%
CYP2C9 inhibition + 0.5628 56.28%
CYP2C19 inhibition - 0.6417 64.17%
CYP2D6 inhibition + 0.5685 56.85%
CYP1A2 inhibition + 0.7953 79.53%
CYP2C8 inhibition + 0.8370 83.70%
CYP inhibitory promiscuity + 0.6879 68.79%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8400 84.00%
Carcinogenicity (trinary) Non-required 0.6260 62.60%
Eye corrosion - 0.9838 98.38%
Eye irritation - 0.9915 99.15%
Skin irritation - 0.7762 77.62%
Skin corrosion - 0.9319 93.19%
Ames mutagenesis + 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8584 85.84%
Micronuclear + 0.6000 60.00%
Hepatotoxicity + 0.5996 59.96%
skin sensitisation - 0.8485 84.85%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.6149 61.49%
Acute Oral Toxicity (c) III 0.5414 54.14%
Estrogen receptor binding + 0.9160 91.60%
Androgen receptor binding + 0.7382 73.82%
Thyroid receptor binding + 0.6742 67.42%
Glucocorticoid receptor binding + 0.7841 78.41%
Aromatase binding - 0.5179 51.79%
PPAR gamma - 0.5750 57.50%
Honey bee toxicity - 0.7794 77.94%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9723 97.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.25% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.61% 91.49%
CHEMBL240 Q12809 HERG 96.26% 89.76%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.53% 96.09%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 92.15% 94.80%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 90.58% 96.00%
CHEMBL255 P29275 Adenosine A2b receptor 89.51% 98.59%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.81% 85.14%
CHEMBL4208 P20618 Proteasome component C5 87.79% 90.00%
CHEMBL2581 P07339 Cathepsin D 87.04% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.31% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.11% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.63% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.58% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.91% 92.62%
CHEMBL3192 Q9BY41 Histone deacetylase 8 82.71% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.10% 89.00%
CHEMBL5028 O14672 ADAM10 80.66% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rauvolfia serpentina

Cross-Links

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PubChem 5351483
NPASS NPC74355