Seragamide A

Details

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Internal ID 45ce6598-8d6a-4081-a34f-be34f5aac6f6
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name (3S,6R,9S,12S,14E,16R,18S)-3-[(1R)-1-hydroxyethyl]-6-[(4-hydroxy-3-iodophenyl)methyl]-7,9,12,14,16,18-hexamethyl-1-oxa-4,7,10-triazacyclooctadec-14-ene-2,5,8,11-tetrone
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C29H42IN3O7/c1-15-10-16(2)12-18(4)40-29(39)25(20(6)34)32-27(37)23(14-21-8-9-24(35)22(30)13-21)33(7)28(38)19(5)31-26(36)17(3)11-15/h8-10,13,16-20,23,25,34-35H,11-12,14H2,1-7H3,(H,31,36)(H,32,37)/b15-10+/t16-,17-,18-,19-,20+,23+,25-/m0/s1
InChI Key FTQSOFUKNCQBTQ-OKJNZYHKSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H42IN3O7
Molecular Weight 671.60 g/mol
Exact Mass 671.20675 g/mol
Topological Polar Surface Area (TPSA) 145.00 Ų
XlogP 4.10
Atomic LogP (AlogP) 2.68
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Seragamide A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8527 85.27%
Caco-2 - 0.8034 80.34%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.4644 46.44%
OATP2B1 inhibitior - 0.7178 71.78%
OATP1B1 inhibitior + 0.8006 80.06%
OATP1B3 inhibitior + 0.9146 91.46%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9068 90.68%
BSEP inhibitior + 0.7478 74.78%
P-glycoprotein inhibitior + 0.7084 70.84%
P-glycoprotein substrate + 0.7716 77.16%
CYP3A4 substrate + 0.6723 67.23%
CYP2C9 substrate - 0.6043 60.43%
CYP2D6 substrate - 0.8235 82.35%
CYP3A4 inhibition - 0.6015 60.15%
CYP2C9 inhibition - 0.8287 82.87%
CYP2C19 inhibition - 0.7632 76.32%
CYP2D6 inhibition - 0.8845 88.45%
CYP1A2 inhibition - 0.8136 81.36%
CYP2C8 inhibition + 0.5965 59.65%
CYP inhibitory promiscuity - 0.9341 93.41%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.7548 75.48%
Carcinogenicity (trinary) Non-required 0.5477 54.77%
Eye corrosion - 0.9852 98.52%
Eye irritation - 0.9437 94.37%
Skin irritation - 0.7707 77.07%
Skin corrosion - 0.9285 92.85%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4453 44.53%
Micronuclear + 0.8300 83.00%
Hepatotoxicity + 0.5962 59.62%
skin sensitisation - 0.8430 84.30%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.8463 84.63%
Acute Oral Toxicity (c) III 0.5969 59.69%
Estrogen receptor binding + 0.7472 74.72%
Androgen receptor binding + 0.7100 71.00%
Thyroid receptor binding + 0.5832 58.32%
Glucocorticoid receptor binding + 0.7721 77.21%
Aromatase binding + 0.5372 53.72%
PPAR gamma + 0.7039 70.39%
Honey bee toxicity - 0.7883 78.83%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6100 61.00%
Fish aquatic toxicity + 0.9764 97.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.34% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.96% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.67% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.57% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.67% 91.11%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 96.06% 99.15%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.00% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.88% 89.00%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 91.21% 93.40%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.77% 97.09%
CHEMBL4208 P20618 Proteasome component C5 90.38% 90.00%
CHEMBL5103 Q969S8 Histone deacetylase 10 90.23% 90.08%
CHEMBL1949 P62937 Cyclophilin A 88.92% 98.57%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.34% 86.92%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 87.19% 90.71%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.23% 92.88%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.95% 95.89%
CHEMBL4072 P07858 Cathepsin B 84.58% 93.67%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.76% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.69% 86.33%
CHEMBL5314 Q06418 Tyrosine-protein kinase receptor TYRO3 83.40% 96.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.14% 93.03%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 81.73% 96.37%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.36% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.94% 97.25%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 11686166
LOTUS LTS0031224
wikiData Q105001232