Seco-Pseudopterosin D

Details

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Internal ID 48d1c168-34b9-4feb-98e7-c0afe2c2f21e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Diterpene glycosides
IUPAC Name [(3R,4S,5S,6S)-4,5-dihydroxy-6-[[(5R,8S)-2-hydroxy-3,8-dimethyl-5-[(2S)-6-methylhept-5-en-2-yl]-5,6,7,8-tetrahydronaphthalen-1-yl]oxy]oxan-3-yl] acetate
SMILES (Canonical) CC1CCC(C2=C1C(=C(C(=C2)C)O)OC3C(C(C(CO3)OC(=O)C)O)O)C(C)CCC=C(C)C
SMILES (Isomeric) C[C@H]1CC[C@@H](C2=C1C(=C(C(=C2)C)O)O[C@H]3[C@H]([C@@H]([C@@H](CO3)OC(=O)C)O)O)[C@@H](C)CCC=C(C)C
InChI InChI=1S/C27H40O7/c1-14(2)8-7-9-15(3)19-11-10-16(4)22-20(19)12-17(5)23(29)26(22)34-27-25(31)24(30)21(13-32-27)33-18(6)28/h8,12,15-16,19,21,24-25,27,29-31H,7,9-11,13H2,1-6H3/t15-,16-,19+,21+,24+,25-,27-/m0/s1
InChI Key PMGVYJKVBYDRRO-AKINWKJVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H40O7
Molecular Weight 476.60 g/mol
Exact Mass 476.27740361 g/mol
Topological Polar Surface Area (TPSA) 105.00 Ų
XlogP 5.20
Atomic LogP (AlogP) 4.45
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 7

Synonyms

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[(3R,4S,5S,6S)-4,5-dihydroxy-6-[[(5R,8S)-2-hydroxy-3,8-dimethyl-5-[(2S)-6-methylhept-5-en-2-yl]-5,6,7,8-tetrahydronaphthalen-1-yl]oxy]oxan-3-yl] acetate
seco-pseudopterosin D
RefChem:182155
CHEMBL486620

2D Structure

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2D Structure of Seco-Pseudopterosin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9433 94.33%
Caco-2 - 0.7037 70.37%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.8707 87.07%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8196 81.96%
OATP1B3 inhibitior + 0.8073 80.73%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6204 62.04%
P-glycoprotein inhibitior - 0.4555 45.55%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6744 67.44%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8634 86.34%
CYP3A4 inhibition - 0.7759 77.59%
CYP2C9 inhibition - 0.6313 63.13%
CYP2C19 inhibition + 0.7220 72.20%
CYP2D6 inhibition - 0.7342 73.42%
CYP1A2 inhibition + 0.9394 93.94%
CYP2C8 inhibition + 0.4509 45.09%
CYP inhibitory promiscuity - 0.7095 70.95%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.7436 74.36%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.9468 94.68%
Skin irritation - 0.7786 77.86%
Skin corrosion - 0.9599 95.99%
Ames mutagenesis + 0.5246 52.46%
Human Ether-a-go-go-Related Gene inhibition - 0.5089 50.89%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6447 64.47%
skin sensitisation - 0.8223 82.23%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.5875 58.75%
Nephrotoxicity - 0.9404 94.04%
Acute Oral Toxicity (c) III 0.5086 50.86%
Estrogen receptor binding + 0.7405 74.05%
Androgen receptor binding + 0.7480 74.80%
Thyroid receptor binding + 0.5178 51.78%
Glucocorticoid receptor binding + 0.6697 66.97%
Aromatase binding + 0.5431 54.31%
PPAR gamma - 0.5256 52.56%
Honey bee toxicity - 0.7834 78.34%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9973 99.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.01% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.85% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 93.17% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.13% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.00% 94.45%
CHEMBL3359 P21462 Formyl peptide receptor 1 89.86% 93.56%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 89.57% 83.57%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.14% 99.17%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 88.69% 90.71%
CHEMBL4581 P52732 Kinesin-like protein 1 88.65% 93.18%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.97% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 86.83% 96.47%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 86.27% 90.24%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.70% 95.89%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 85.11% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.40% 86.33%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 84.31% 89.62%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.54% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.52% 95.56%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 82.30% 98.75%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.22% 94.33%
CHEMBL5028 O14672 ADAM10 82.13% 97.50%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.86% 89.50%
CHEMBL5203 P33316 dUTP pyrophosphatase 81.56% 99.18%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 21725553
LOTUS LTS0021732
wikiData Q105211457