Sarmentosin epoxide

Details

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Internal ID b0063f69-12a1-4ae5-a3b4-2e133784908b
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name 2-(hydroxymethyl)-3-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxirane-2-carbonitrile
SMILES (Canonical) C(C1C(C(C(C(O1)OCC2C(O2)(CO)C#N)O)O)O)O
SMILES (Isomeric) C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)OCC2C(O2)(CO)C#N)O)O)O)O
InChI InChI=1S/C11H17NO8/c12-3-11(4-14)6(20-11)2-18-10-9(17)8(16)7(15)5(1-13)19-10/h5-10,13-17H,1-2,4H2/t5-,6?,7-,8+,9-,10-,11?/m1/s1
InChI Key MGWCXJDKHMCXRL-YMGPVYFXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C11H17NO8
Molecular Weight 291.25 g/mol
Exact Mass 291.09541650 g/mol
Topological Polar Surface Area (TPSA) 156.00 Ų
XlogP -3.40
Atomic LogP (AlogP) -3.54
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

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81907-02-0
C08341
2-(hydroxymethyl)-3-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxirane-2-carbonitrile
AC1L9B8A
CHEBI:9034
DTXSID40331582
Q27108225
2-(hydroxymethyl)-3-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydropyran-2-yl]oxymethyl]oxirane-2-carbonitrile

2D Structure

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2D Structure of Sarmentosin epoxide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9560 95.60%
Caco-2 - 0.8997 89.97%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7412 74.12%
OATP2B1 inhibitior - 0.8580 85.80%
OATP1B1 inhibitior + 0.9358 93.58%
OATP1B3 inhibitior + 0.9435 94.35%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9443 94.43%
P-glycoprotein inhibitior - 0.9382 93.82%
P-glycoprotein substrate - 0.9584 95.84%
CYP3A4 substrate + 0.5290 52.90%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8420 84.20%
CYP3A4 inhibition - 0.9599 95.99%
CYP2C9 inhibition - 0.8680 86.80%
CYP2C19 inhibition - 0.8339 83.39%
CYP2D6 inhibition - 0.9256 92.56%
CYP1A2 inhibition - 0.8710 87.10%
CYP2C8 inhibition - 0.7391 73.91%
CYP inhibitory promiscuity - 0.9491 94.91%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6314 63.14%
Eye corrosion - 0.9839 98.39%
Eye irritation - 0.9768 97.68%
Skin irritation - 0.8137 81.37%
Skin corrosion - 0.9419 94.19%
Ames mutagenesis - 0.7854 78.54%
Human Ether-a-go-go-Related Gene inhibition - 0.5204 52.04%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.7949 79.49%
skin sensitisation - 0.8456 84.56%
Respiratory toxicity - 0.7556 75.56%
Reproductive toxicity - 0.6111 61.11%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity + 0.7425 74.25%
Acute Oral Toxicity (c) III 0.4173 41.73%
Estrogen receptor binding - 0.5686 56.86%
Androgen receptor binding - 0.6818 68.18%
Thyroid receptor binding + 0.6943 69.43%
Glucocorticoid receptor binding + 0.6321 63.21%
Aromatase binding + 0.8353 83.53%
PPAR gamma + 0.6615 66.15%
Honey bee toxicity - 0.6090 60.90%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity - 0.8898 88.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.10% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 95.69% 96.61%
CHEMBL221 P23219 Cyclooxygenase-1 92.39% 90.17%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 91.12% 95.83%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.59% 96.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.35% 86.92%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 88.11% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 84.72% 95.93%
CHEMBL1871 P10275 Androgen Receptor 83.90% 96.43%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.01% 97.09%
CHEMBL3837 P07711 Cathepsin L 82.48% 96.61%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.41% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodiola chrysanthemifolia subsp. sacra
Sedum cepaea

Cross-Links

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PubChem 441472
NPASS NPC304572