Sargachromanol D

Details

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Internal ID f2518a45-81c7-4f7a-b655-ba645313df07
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Quinone and hydroquinone lipids > Vitamin E compounds > Tocotrienols
IUPAC Name (4R,5S,6E,10E)-13-[(2R)-6-hydroxy-2,8-dimethyl-3,4-dihydrochromen-2-yl]-2,6,10-trimethyltrideca-2,6,10-triene-4,5-diol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H40O4/c1-18(2)15-24(29)25(30)20(4)11-7-9-19(3)10-8-13-27(6)14-12-22-17-23(28)16-21(5)26(22)31-27/h10-11,15-17,24-25,28-30H,7-9,12-14H2,1-6H3/b19-10+,20-11+/t24-,25+,27-/m1/s1
InChI Key YIWOAJFKIIOXPS-RYZLOPLISA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C27H40O4
Molecular Weight 428.60 g/mol
Exact Mass 428.29265975 g/mol
Topological Polar Surface Area (TPSA) 69.90 Ų
XlogP 6.40
Atomic LogP (AlogP) 5.93
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 9

Synonyms

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Sargachromanol D, (+)-
Sargachromano D
UNII-1RKQ26739T
1RKQ26739T
856414-53-4
(R)-3,4-Dihydro-2-((3E,7E,9S,10R)-9,10-dihydroxy-4,8,12-trimethyltrideca-3,7,11-trienyl)-2,8-dimethyl-2H-chromen-6-ol
2,6,10-Tridecatriene-4,5-diol, 13-((2R)-3,4-dihydro-6-hydroxy-2,8-dimethyl-2H-1-benzopyran-2-yl)-2,6,10-trimethyl-, (4R,5S,6E,10E)-
CHEMBL465202
DTXSID70234890
BDBM50483663
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Sargachromanol D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9686 96.86%
Caco-2 - 0.5464 54.64%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7267 72.67%
OATP2B1 inhibitior - 0.8582 85.82%
OATP1B1 inhibitior + 0.8500 85.00%
OATP1B3 inhibitior + 0.9573 95.73%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.8526 85.26%
P-glycoprotein inhibitior + 0.7322 73.22%
P-glycoprotein substrate - 0.5650 56.50%
CYP3A4 substrate + 0.6728 67.28%
CYP2C9 substrate - 0.7919 79.19%
CYP2D6 substrate + 0.4543 45.43%
CYP3A4 inhibition - 0.7905 79.05%
CYP2C9 inhibition - 0.7699 76.99%
CYP2C19 inhibition - 0.6010 60.10%
CYP2D6 inhibition - 0.8319 83.19%
CYP1A2 inhibition - 0.5266 52.66%
CYP2C8 inhibition + 0.6914 69.14%
CYP inhibitory promiscuity - 0.6487 64.87%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.8900 89.00%
Carcinogenicity (trinary) Non-required 0.7306 73.06%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9389 93.89%
Skin irritation - 0.6887 68.87%
Skin corrosion - 0.9384 93.84%
Ames mutagenesis - 0.6637 66.37%
Human Ether-a-go-go-Related Gene inhibition + 0.8876 88.76%
Micronuclear - 0.9000 90.00%
Hepatotoxicity + 0.5149 51.49%
skin sensitisation - 0.7182 71.82%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity - 0.8340 83.40%
Acute Oral Toxicity (c) III 0.6267 62.67%
Estrogen receptor binding + 0.7162 71.62%
Androgen receptor binding + 0.5940 59.40%
Thyroid receptor binding + 0.7033 70.33%
Glucocorticoid receptor binding + 0.6982 69.82%
Aromatase binding + 0.6925 69.25%
PPAR gamma + 0.7570 75.70%
Honey bee toxicity - 0.7946 79.46%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9890 98.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.43% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 96.24% 94.73%
CHEMBL2581 P07339 Cathepsin D 94.25% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.33% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.68% 94.45%
CHEMBL233 P35372 Mu opioid receptor 89.04% 97.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.23% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.45% 86.33%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 84.74% 91.79%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 84.21% 93.10%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.35% 89.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 82.75% 98.75%
CHEMBL4581 P52732 Kinesin-like protein 1 82.50% 93.18%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.45% 90.71%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 81.31% 92.08%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.64% 85.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.48% 95.89%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.19% 93.40%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 11247397
NPASS NPC204535
ChEMBL CHEMBL465202
LOTUS LTS0051273
wikiData Q27252796