Saponin A

Details

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Internal ID 3c4ff7b1-47fe-4013-a1e9-21e222bfadb4
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name 5-[4,5-dihydroxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxy-3,4-dihydroxy-6-[[9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-14-oxo-2,3,4a,5,6,7,8,9,10,12,12a,14a-dodecahydro-1H-picen-3-yl]oxy]oxane-2-carboxylic acid
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(C(OC3OC4CCC5(C(C4(C)CO)CCC6(C5C(=O)C=C7C6(CCC8(C7CC(CC8O)(C)C)C)C)C)C)C(=O)O)O)O)CO)O)O)O)O)O
SMILES (Isomeric) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(C(OC3OC4CCC5(C(C4(C)CO)CCC6(C5C(=O)C=C7C6(CCC8(C7CC(CC8O)(C)C)C)C)C)C)C(=O)O)O)O)CO)O)O)O)O)O
InChI InChI=1S/C48H76O19/c1-20-28(53)30(55)34(59)40(62-20)66-36-31(56)29(54)24(18-49)63-41(36)67-37-33(58)32(57)35(39(60)61)65-42(37)64-27-10-11-45(5)25(46(27,6)19-50)9-12-48(8)38(45)23(51)15-21-22-16-43(2,3)17-26(52)44(22,4)13-14-47(21,48)7/h15,20,22,24-38,40-42,49-50,52-59H,9-14,16-19H2,1-8H3,(H,60,61)
InChI Key SMRPGWBDLOQHOS-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C48H76O19
Molecular Weight 957.10 g/mol
Exact Mass 956.49808019 g/mol
Topological Polar Surface Area (TPSA) 312.00 Ų
XlogP 1.30
Atomic LogP (AlogP) -0.12
H-Bond Acceptor 18
H-Bond Donor 11
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Saponin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.9165 91.65%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7551 75.51%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.8513 85.13%
P-glycoprotein inhibitior + 0.7533 75.33%
P-glycoprotein substrate - 0.6134 61.34%
CYP3A4 substrate + 0.7272 72.72%
CYP2C9 substrate - 0.7960 79.60%
CYP2D6 substrate - 0.8973 89.73%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7226 72.26%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9062 90.62%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.9100 91.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7397 73.97%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.5592 55.92%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.8283 82.83%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.8145 81.45%
Androgen receptor binding + 0.7469 74.69%
Thyroid receptor binding - 0.5699 56.99%
Glucocorticoid receptor binding + 0.7222 72.22%
Aromatase binding + 0.6524 65.24%
PPAR gamma + 0.8092 80.92%
Honey bee toxicity - 0.7224 72.24%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3714130 P46095 G-protein coupled receptor 6 98.26% 97.36%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.88% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.41% 95.56%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 91.04% 93.00%
CHEMBL2581 P07339 Cathepsin D 90.47% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.17% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 90.04% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.58% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.37% 96.09%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 88.90% 94.78%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.14% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.66% 97.09%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.78% 91.07%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.88% 100.00%
CHEMBL221 P23219 Cyclooxygenase-1 81.05% 90.17%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.00% 99.17%
CHEMBL5255 O00206 Toll-like receptor 4 80.21% 92.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Astragalus sinicus

Cross-Links

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PubChem 85144169
LOTUS LTS0118438
wikiData Q105256124