Sansanmycin N

Details

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Internal ID 6e718613-8c7c-4a1a-aa5d-2f09a6bdbfda
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Dipeptides
IUPAC Name (2S)-2-[[(2S)-1-[[(2S,3S)-1-[[(Z)-[(4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl]amino]-3-[[(3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinoline-3-carbonyl]-methylamino]-1-oxobutan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]carbamoylamino]-3-(1H-indol-3-yl)propanoic acid
SMILES (Canonical) CC(C(C(=O)NC=C1CC(C(O1)N2C=CC(=O)NC2=O)O)NC(=O)C(CCSC)NC(=O)NC(CC3=CNC4=CC=CC=C43)C(=O)O)N(C)C(=O)C5CC6=C(CN5)C=CC(=C6)O
SMILES (Isomeric) C[C@@H]([C@@H](C(=O)N/C=C\1/C[C@H]([C@@H](O1)N2C=CC(=O)NC2=O)O)NC(=O)[C@H](CCSC)NC(=O)N[C@@H](CC3=CNC4=CC=CC=C43)C(=O)O)N(C)C(=O)[C@@H]5CC6=C(CN5)C=CC(=C6)O
InChI InChI=1S/C41H49N9O11S/c1-21(49(2)37(56)30-15-23-14-25(51)9-8-22(23)18-43-30)34(36(55)44-20-26-17-32(52)38(61-26)50-12-10-33(53)47-41(50)60)48-35(54)29(11-13-62-3)45-40(59)46-31(39(57)58)16-24-19-42-28-7-5-4-6-27(24)28/h4-10,12,14,19-21,29-32,34,38,42-43,51-52H,11,13,15-18H2,1-3H3,(H,44,55)(H,48,54)(H,57,58)(H2,45,46,59)(H,47,53,60)/b26-20-/t21-,29-,30-,31-,32+,34-,38+/m0/s1
InChI Key YFIDKVVEMUNOKN-IFKIKDRDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C41H49N9O11S
Molecular Weight 875.90 g/mol
Exact Mass 875.32722459 g/mol
Topological Polar Surface Area (TPSA) 309.00 Ų
XlogP -2.00
Atomic LogP (AlogP) 0.12
H-Bond Acceptor 13
H-Bond Donor 10
Rotatable Bonds 16

Synonyms

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(2S)-2-((((1S)-1-(((1S,2S)-2-(1-((3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl)-N-methylformamido)-1-((((2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene)methyl)-C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)-3-(methylsulfanyl)propyl)-C-hydroxycarbonimidoyl)amino)-3-(1H-indol-3-yl)propanoate
(2S)-2-((((1S)-1-(((1S,2S)-2-(1-((3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl)-N-methylformamido)-1-((((2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene)methyl)-C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)-3-(methylsulphanyl)propyl)-C-hydroxycarbonimidoyl)amino)-3-(1H-indol-3-yl)propanoate
(2S)-2-((((1S)-1-(((1S,2S)-2-(1-((3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl)-N-methylformamido)-1-((((2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene)methyl)-C-hydroxycarbonimidoyl)propyl)-C-hydroxycarbonimidoyl)-3-(methylsulphanyl)propyl)-C-hydroxycarbonimidoyl)amino)-3-(1H-indol-3-yl)propanoic acid
(2S)-2-(((2S)-1-(((2S,3S)-1-(((Z)-((4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene)methyl)amino)-3-(((3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinoline-3-carbonyl)-methylamino)-1-oxobutan-2-yl)amino)-4-methylsulfanyl-1-oxobutan-2-yl)carbamoylamino)-3-(1H-indol-3-yl)propanoic acid
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulfanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoate
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulphanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoate
(2S)-2-({[(1S)-1-{[(1S,2S)-2-{1-[(3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinolin-3-yl]-N-methylformamido}-1-({[(2Z,4R,5R)-4-hydroxy-5-(4-hydroxy-2-oxo-1,2-dihydropyrimidin-1-yl)oxolan-2-ylidene]methyl}-C-hydroxycarbonimidoyl)propyl]-C-hydroxycarbonimidoyl}-3-(methylsulphanyl)propyl]-C-hydroxycarbonimidoyl}amino)-3-(1H-indol-3-yl)propanoic acid
(2S)-2-[[(2S)-1-[[(2S,3S)-1-[[(Z)-[(4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-2-ylidene]methyl]amino]-3-[[(3S)-6-hydroxy-1,2,3,4-tetrahydroisoquinoline-3-carbonyl]-methylamino]-1-oxobutan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]carbamoylamino]-3-(1H-indol-3-yl)propanoic acid
RefChem:181191
CHEBI:216782
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Sansanmycin N

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8662 86.62%
Caco-2 - 0.8709 87.09%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.4101 41.01%
OATP2B1 inhibitior - 0.7137 71.37%
OATP1B1 inhibitior + 0.7954 79.54%
OATP1B3 inhibitior + 0.9270 92.70%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7811 78.11%
BSEP inhibitior + 0.8535 85.35%
P-glycoprotein inhibitior + 0.7487 74.87%
P-glycoprotein substrate + 0.8418 84.18%
CYP3A4 substrate + 0.7530 75.30%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8475 84.75%
CYP3A4 inhibition - 0.5704 57.04%
CYP2C9 inhibition - 0.7439 74.39%
CYP2C19 inhibition - 0.8358 83.58%
CYP2D6 inhibition - 0.8647 86.47%
CYP1A2 inhibition - 0.7912 79.12%
CYP2C8 inhibition + 0.7827 78.27%
CYP inhibitory promiscuity - 0.8709 87.09%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5702 57.02%
Eye corrosion - 0.9851 98.51%
Eye irritation - 0.9101 91.01%
Skin irritation - 0.7665 76.65%
Skin corrosion - 0.9267 92.67%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6542 65.42%
Micronuclear + 0.8300 83.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8627 86.27%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.7577 75.77%
Acute Oral Toxicity (c) III 0.6172 61.72%
Estrogen receptor binding + 0.8160 81.60%
Androgen receptor binding + 0.7509 75.09%
Thyroid receptor binding + 0.6096 60.96%
Glucocorticoid receptor binding + 0.5803 58.03%
Aromatase binding + 0.6099 60.99%
PPAR gamma + 0.7850 78.50%
Honey bee toxicity - 0.6159 61.59%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9256 92.56%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.69% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.35% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.88% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.35% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.94% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.71% 99.17%
CHEMBL5103 Q969S8 Histone deacetylase 10 94.40% 90.08%
CHEMBL236 P41143 Delta opioid receptor 94.02% 99.35%
CHEMBL3310 Q96DB2 Histone deacetylase 11 93.60% 88.56%
CHEMBL1914 P06276 Butyrylcholinesterase 93.10% 95.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.91% 89.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 92.15% 93.10%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.44% 93.56%
CHEMBL255 P29275 Adenosine A2b receptor 91.26% 98.59%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.97% 97.14%
CHEMBL3401 O75469 Pregnane X receptor 89.82% 94.73%
CHEMBL340 P08684 Cytochrome P450 3A4 89.41% 91.19%
CHEMBL2535 P11166 Glucose transporter 87.16% 98.75%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 85.95% 98.33%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 85.87% 100.00%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.46% 91.71%
CHEMBL5028 O14672 ADAM10 83.87% 97.50%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.87% 99.23%
CHEMBL213 P08588 Beta-1 adrenergic receptor 83.26% 95.56%
CHEMBL4644 P41968 Melanocortin receptor 3 82.72% 99.52%
CHEMBL1781 P11387 DNA topoisomerase I 82.30% 97.00%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 82.20% 95.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.56% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.73% 97.09%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 80.62% 90.71%
CHEMBL259 P32245 Melanocortin receptor 4 80.55% 95.38%
CHEMBL2413 P32246 C-C chemokine receptor type 1 80.48% 89.50%
CHEMBL1937 Q92769 Histone deacetylase 2 80.12% 94.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 139586146
LOTUS LTS0042714
wikiData Q77499817