Samaderine Y

Details

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Internal ID 13ba4643-9d7b-4614-bf20-2b47b201a17c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene lactones > Quassinoids
IUPAC Name (1R,2R,6R,8S,12S,13S,14R,15R,16S,17S)-12,15,16-trihydroxy-9,13,17-trimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-ene-4,11-dione
SMILES (Canonical) CC1=CC(=O)C(C2(C1CC3C45C2C(C(C(C4CC(=O)O3)(OC5)C)O)O)C)O
SMILES (Isomeric) CC1=CC(=O)[C@H]([C@]2([C@H]1C[C@@H]3[C@]45[C@@H]2[C@H]([C@@H]([C@]([C@@H]4CC(=O)O3)(OC5)C)O)O)C)O
InChI InChI=1S/C20H26O7/c1-8-4-10(21)16(24)18(2)9(8)5-12-20-7-26-19(3,11(20)6-13(22)27-12)17(25)14(23)15(18)20/h4,9,11-12,14-17,23-25H,5-7H2,1-3H3/t9-,11-,12+,14+,15+,16+,17-,18-,19-,20+/m0/s1
InChI Key RIJRPXOHKGHZPR-SEAJDPHJSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C20H26O7
Molecular Weight 378.40 g/mol
Exact Mass 378.16785316 g/mol
Topological Polar Surface Area (TPSA) 113.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -0.04
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 0

Synonyms

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(-)-samaderine Y
(1beta,11beta,12alpha)-1,11,12-Trihydroxy-13,20-epoxypicras-3-ene-2,16-dione
CHEBI:66163
Q27134691
(1R,2R,6R,8S,12S,13S,14R,15R,16S,17S)-12,15,16-trihydroxy-9,13,17-trimethyl-5,18-dioxapentacyclo[12.5.0.01,6.02,17.08,13]nonadec-9-ene-4,11-dione
159903-53-4

2D Structure

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2D Structure of Samaderine Y

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9179 91.79%
Caco-2 - 0.6858 68.58%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.5571 55.71%
Subcellular localzation Mitochondria 0.8119 81.19%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8536 85.36%
OATP1B3 inhibitior + 0.9740 97.40%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.6714 67.14%
P-glycoprotein inhibitior - 0.6881 68.81%
P-glycoprotein substrate + 0.7071 70.71%
CYP3A4 substrate + 0.6532 65.32%
CYP2C9 substrate - 0.8058 80.58%
CYP2D6 substrate - 0.8868 88.68%
CYP3A4 inhibition - 0.9077 90.77%
CYP2C9 inhibition - 0.9078 90.78%
CYP2C19 inhibition - 0.9017 90.17%
CYP2D6 inhibition - 0.9521 95.21%
CYP1A2 inhibition - 0.8386 83.86%
CYP2C8 inhibition - 0.7658 76.58%
CYP inhibitory promiscuity - 0.9521 95.21%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4985 49.85%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9575 95.75%
Skin irritation - 0.5294 52.94%
Skin corrosion - 0.9184 91.84%
Ames mutagenesis - 0.6464 64.64%
Human Ether-a-go-go-Related Gene inhibition - 0.6308 63.08%
Micronuclear - 0.5900 59.00%
Hepatotoxicity + 0.5376 53.76%
skin sensitisation - 0.8408 84.08%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity + 0.8570 85.70%
Acute Oral Toxicity (c) I 0.3874 38.74%
Estrogen receptor binding + 0.8916 89.16%
Androgen receptor binding + 0.5967 59.67%
Thyroid receptor binding + 0.5265 52.65%
Glucocorticoid receptor binding + 0.7848 78.48%
Aromatase binding + 0.5812 58.12%
PPAR gamma + 0.6120 61.20%
Honey bee toxicity - 0.8157 81.57%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9811 98.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.28% 91.11%
CHEMBL2581 P07339 Cathepsin D 92.62% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.38% 95.56%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.51% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.99% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.48% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.22% 99.23%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.09% 97.25%
CHEMBL221 P23219 Cyclooxygenase-1 85.73% 90.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.18% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.95% 96.09%
CHEMBL2996 Q05655 Protein kinase C delta 83.63% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.33% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ailanthus triphysa
Eurycoma harmandiana
Quassia indica

Cross-Links

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PubChem 25077775
NPASS NPC99230
LOTUS LTS0251862
wikiData Q27134691