Sakyomicin B

Details

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Internal ID 35064411-9e20-42ef-9e87-3520952e201c
Taxonomy Phenylpropanoids and polyketides > Angucyclines
IUPAC Name (2R,3S,4aR,12bS)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrobenzo[a]anthracene-1,7,12-trione
SMILES (Canonical) CC1(CC2(C=CC3=C(C2(C(=O)C1O)O)C(=O)C4=C(C3=O)C(=CC=C4)O)O)O
SMILES (Isomeric) C[C@@]1(C[C@]2(C=CC3=C([C@]2(C(=O)[C@@H]1O)O)C(=O)C4=C(C3=O)C(=CC=C4)O)O)O
InChI InChI=1S/C19H16O8/c1-17(25)7-18(26)6-5-9-12(19(18,27)16(24)15(17)23)14(22)8-3-2-4-10(20)11(8)13(9)21/h2-6,15,20,23,25-27H,7H2,1H3/t15-,17-,18-,19+/m0/s1
InChI Key TVRZORMBTKRMAO-DSLXNQLJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H16O8
Molecular Weight 372.30 g/mol
Exact Mass 372.08451746 g/mol
Topological Polar Surface Area (TPSA) 152.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -0.82
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 0

Synonyms

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(2R,3S,4aR,12bS)-2,3,4a,8,12b-pentahydroxy-3-methyl-2,4-dihydrobenzo(a)anthracene-1,7,12-trione
RefChem:180870
(2S,3R,4aS,12bR)-2,3,4a,8-tetrahydroxy-12b-((2R,5R,6R)-5-hydroxy-6-methyloxan-2-yl)oxy-3-methyl-2,4-dihydrobenzo(a)anthracene-1,7,12-trione
86413-75-4
Sakyomicin A
Sakyomicin B
86470-27-1
Benz(a)anthracene-1,7,12(2H)-trione, 3,4,4a,12b-tetrahydro-2,3,4a,8,12b-pentahydroxy-3-methyl-, (2S-(2-alpha,3-beta,4a-alpha,12b-alpha))-
SCHEMBL29884585
DTXSID00235572
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Sakyomicin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9912 99.12%
Caco-2 - 0.8735 87.35%
Blood Brain Barrier - 0.5879 58.79%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.6750 67.50%
OATP2B1 inhibitior - 0.5642 56.42%
OATP1B1 inhibitior + 0.9079 90.79%
OATP1B3 inhibitior + 0.9588 95.88%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9338 93.38%
BSEP inhibitior - 0.8216 82.16%
P-glycoprotein inhibitior - 0.9105 91.05%
P-glycoprotein substrate - 0.5868 58.68%
CYP3A4 substrate + 0.6554 65.54%
CYP2C9 substrate - 0.8140 81.40%
CYP2D6 substrate - 0.8564 85.64%
CYP3A4 inhibition - 0.8303 83.03%
CYP2C9 inhibition - 0.5731 57.31%
CYP2C19 inhibition - 0.7546 75.46%
CYP2D6 inhibition - 0.8072 80.72%
CYP1A2 inhibition - 0.5145 51.45%
CYP2C8 inhibition - 0.7164 71.64%
CYP inhibitory promiscuity - 0.8189 81.89%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9011 90.11%
Carcinogenicity (trinary) Non-required 0.5145 51.45%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.8483 84.83%
Skin irritation - 0.5878 58.78%
Skin corrosion - 0.8516 85.16%
Ames mutagenesis + 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8704 87.04%
Micronuclear + 0.5300 53.00%
Hepatotoxicity + 0.6909 69.09%
skin sensitisation - 0.5304 53.04%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.6558 65.58%
Acute Oral Toxicity (c) III 0.4375 43.75%
Estrogen receptor binding + 0.7026 70.26%
Androgen receptor binding + 0.6894 68.94%
Thyroid receptor binding - 0.4884 48.84%
Glucocorticoid receptor binding + 0.7339 73.39%
Aromatase binding + 0.6332 63.32%
PPAR gamma + 0.7999 79.99%
Honey bee toxicity - 0.8906 89.06%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9859 98.59%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.60% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.69% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 96.31% 91.49%
CHEMBL1937 Q92769 Histone deacetylase 2 95.51% 94.75%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.23% 91.11%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.40% 99.23%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.28% 96.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.01% 89.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 89.04% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.64% 100.00%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 86.08% 96.67%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.12% 92.88%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 84.89% 96.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.46% 86.33%
CHEMBL221 P23219 Cyclooxygenase-1 84.32% 90.17%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.96% 91.24%
CHEMBL2996 Q05655 Protein kinase C delta 83.86% 97.79%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.52% 95.89%
CHEMBL226 P30542 Adenosine A1 receptor 83.13% 95.93%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 82.08% 93.40%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.16% 93.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 3086225
LOTUS LTS0191359
wikiData Q77382763