saccharumoside D

Details

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Internal ID 07e4732d-8568-409d-9276-4447da01065a
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name methyl 5-[(2S,3R,4S,5S,6R)-3-[(2S,3R,4R)-3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-hydroxybenzoate
SMILES (Canonical) COC(=O)C1=C(C=CC(=C1)OC2C(C(C(C(O2)CO)O)O)OC3C(C(CO3)(CO)O)O)O
SMILES (Isomeric) COC(=O)C1=C(C=CC(=C1)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O[C@H]3[C@@H]([C@](CO3)(CO)O)O)O
InChI InChI=1S/C19H26O13/c1-28-16(26)9-4-8(2-3-10(9)22)30-17-14(13(24)12(23)11(5-20)31-17)32-18-15(25)19(27,6-21)7-29-18/h2-4,11-15,17-18,20-25,27H,5-7H2,1H3/t11-,12-,13+,14-,15+,17-,18+,19-/m1/s1
InChI Key NYGPJXGUWTXKJH-YVNDIJNTSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H26O13
Molecular Weight 462.40 g/mol
Exact Mass 462.13734088 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -3.18
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 7

Synonyms

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CHEBI:68962
CHEMBL1923081
Q27137314

2D Structure

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2D Structure of saccharumoside D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6656 66.56%
Caco-2 - 0.8897 88.97%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6797 67.97%
OATP2B1 inhibitior - 0.8566 85.66%
OATP1B1 inhibitior + 0.9049 90.49%
OATP1B3 inhibitior + 0.9616 96.16%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.6048 60.48%
P-glycoprotein inhibitior - 0.7898 78.98%
P-glycoprotein substrate - 0.7459 74.59%
CYP3A4 substrate + 0.6415 64.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8704 87.04%
CYP3A4 inhibition - 0.8586 85.86%
CYP2C9 inhibition - 0.8806 88.06%
CYP2C19 inhibition - 0.8661 86.61%
CYP2D6 inhibition - 0.9101 91.01%
CYP1A2 inhibition - 0.8912 89.12%
CYP2C8 inhibition - 0.5906 59.06%
CYP inhibitory promiscuity - 0.7833 78.33%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5674 56.74%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9268 92.68%
Skin irritation - 0.8193 81.93%
Skin corrosion - 0.9473 94.73%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3605 36.05%
Micronuclear - 0.5367 53.67%
Hepatotoxicity - 0.5802 58.02%
skin sensitisation - 0.8337 83.37%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.5637 56.37%
Acute Oral Toxicity (c) III 0.7621 76.21%
Estrogen receptor binding + 0.7660 76.60%
Androgen receptor binding - 0.5887 58.87%
Thyroid receptor binding + 0.5828 58.28%
Glucocorticoid receptor binding + 0.6113 61.13%
Aromatase binding + 0.7234 72.34%
PPAR gamma + 0.6500 65.00%
Honey bee toxicity - 0.7868 78.68%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity - 0.6295 62.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.69% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.99% 94.45%
CHEMBL226 P30542 Adenosine A1 receptor 94.58% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.49% 96.09%
CHEMBL4208 P20618 Proteasome component C5 91.62% 90.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.87% 94.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 90.73% 94.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 89.96% 91.07%
CHEMBL1951 P21397 Monoamine oxidase A 89.46% 91.49%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 89.08% 91.24%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.40% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.29% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 87.34% 94.73%
CHEMBL2581 P07339 Cathepsin D 87.31% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 86.26% 97.36%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.12% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.81% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.29% 86.33%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.58% 99.15%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.94% 90.71%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.88% 95.83%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.64% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 82.51% 91.19%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 82.35% 94.42%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.15% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acer saccharum
Epimedium wushanense

Cross-Links

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PubChem 56834592
NPASS NPC183536
LOTUS LTS0084232
wikiData Q27137314