(S)-(+)-Sydonol

Details

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Internal ID 2ee5a2bc-1945-41d6-8302-52278b5b800a
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Sesquiterpenoids
IUPAC Name 5-(hydroxymethyl)-2-[(2S)-2-hydroxy-6-methylheptan-2-yl]phenol
SMILES (Canonical) CC(C)CCCC(C)(C1=C(C=C(C=C1)CO)O)O
SMILES (Isomeric) CC(C)CCC[C@@](C)(C1=C(C=C(C=C1)CO)O)O
InChI InChI=1S/C15H24O3/c1-11(2)5-4-8-15(3,18)13-7-6-12(10-16)9-14(13)17/h6-7,9,11,16-18H,4-5,8,10H2,1-3H3/t15-/m0/s1
InChI Key YOBQORBMRZQKGS-HNNXBMFYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C15H24O3
Molecular Weight 252.35 g/mol
Exact Mass 252.17254462 g/mol
Topological Polar Surface Area (TPSA) 60.70 Ų
XlogP 3.20
Atomic LogP (AlogP) 2.92
H-Bond Acceptor 3
H-Bond Donor 3
Rotatable Bonds 6

Synonyms

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5-(hydroxymethyl)-2-((2S)-2-hydroxy-6-methylheptan-2-yl)phenol
5-(hydroxymethyl)-2-[(2S)-2-hydroxy-6-methylheptan-2-yl]phenol
RefChem:70371
Sydonol
CHEMBL2397439
CHEBI:209216
5-(hydroxymethyl)-2-(2-hydroxy-6-methylheptan-2-yl)phenol
(S)-2-(2-Hydroxy-6-methylheptan-2-yl)-5-(hydroxymethyl)phenol

2D Structure

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2D Structure of (S)-(+)-Sydonol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9871 98.71%
Caco-2 + 0.8894 88.94%
Blood Brain Barrier + 0.5885 58.85%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.7922 79.22%
OATP2B1 inhibitior - 0.8554 85.54%
OATP1B1 inhibitior + 0.9024 90.24%
OATP1B3 inhibitior + 0.9118 91.18%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior - 0.8187 81.87%
P-glycoprotein inhibitior - 0.9721 97.21%
P-glycoprotein substrate - 0.6259 62.59%
CYP3A4 substrate - 0.5889 58.89%
CYP2C9 substrate + 0.5755 57.55%
CYP2D6 substrate - 0.6979 69.79%
CYP3A4 inhibition - 0.5796 57.96%
CYP2C9 inhibition - 0.6052 60.52%
CYP2C19 inhibition - 0.8390 83.90%
CYP2D6 inhibition - 0.9350 93.50%
CYP1A2 inhibition + 0.6759 67.59%
CYP2C8 inhibition - 0.8400 84.00%
CYP inhibitory promiscuity - 0.7930 79.30%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.6069 60.69%
Eye corrosion - 0.9752 97.52%
Eye irritation - 0.5203 52.03%
Skin irritation - 0.6548 65.48%
Skin corrosion - 0.9219 92.19%
Ames mutagenesis - 0.8100 81.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4567 45.67%
Micronuclear - 0.9400 94.00%
Hepatotoxicity - 0.6176 61.76%
skin sensitisation + 0.5187 51.87%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.8865 88.65%
Acute Oral Toxicity (c) III 0.7954 79.54%
Estrogen receptor binding - 0.5000 50.00%
Androgen receptor binding + 0.5334 53.34%
Thyroid receptor binding + 0.7725 77.25%
Glucocorticoid receptor binding - 0.4661 46.61%
Aromatase binding + 0.5801 58.01%
PPAR gamma + 0.6623 66.23%
Honey bee toxicity - 0.9392 93.92%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.23% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.01% 91.11%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 92.86% 97.23%
CHEMBL3401 O75469 Pregnane X receptor 91.24% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.83% 96.09%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 88.95% 97.29%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.16% 99.17%
CHEMBL3492 P49721 Proteasome Macropain subunit 86.52% 90.24%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.66% 94.45%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 85.66% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.29% 95.56%
CHEMBL1907 P15144 Aminopeptidase N 84.19% 93.31%
CHEMBL3524 P56524 Histone deacetylase 4 82.47% 92.97%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.07% 90.71%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.97% 93.56%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 81.35% 94.01%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.25% 93.99%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.66% 86.33%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 80.48% 85.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 25112062
LOTUS LTS0258774
wikiData Q105351228