(S)-4,5-Didehydropipecolic acid

Details

Top
Internal ID 3073f7b2-348a-4607-a3b0-c7caf94f536e
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Alpha amino acids > L-alpha-amino acids
IUPAC Name (2S)-1,2,3,6-tetrahydropyridine-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C6H9NO2/c8-6(9)5-3-1-2-4-7-5/h1-2,5,7H,3-4H2,(H,8,9)/t5-/m0/s1
InChI Key YCQPUTODZKESPK-YFKPBYRVSA-N
Popularity 3 references in papers

Physical and Chemical Properties

Top
Molecular Formula C6H9NO2
Molecular Weight 127.14 g/mol
Exact Mass 127.063328530 g/mol
Topological Polar Surface Area (TPSA) 49.30 Ų
XlogP -2.20
Atomic LogP (AlogP) -0.01
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

Top
(S)-4,5-Didehydropipecolic acid
(S)-1,2,3,6-Tetrahydropyridine-2-carboxylic acid
L-Baikiain
(2S)-1,2,3,6-tetrahydropyridine-2-carboxylic acid
4,5-Dehydropipecolic acid
C08268
PubChem22632
CHEBI:6199
(S)-4,5-dehydropipecolic acid
SCHEMBL18576616
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of (S)-4,5-Didehydropipecolic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9799 97.99%
Caco-2 - 0.8389 83.89%
Blood Brain Barrier + 0.8000 80.00%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Mitochondria 0.5379 53.79%
OATP2B1 inhibitior - 0.8454 84.54%
OATP1B1 inhibitior + 0.9706 97.06%
OATP1B3 inhibitior + 0.9530 95.30%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.9510 95.10%
P-glycoprotein inhibitior - 0.9923 99.23%
P-glycoprotein substrate - 0.9766 97.66%
CYP3A4 substrate - 0.7034 70.34%
CYP2C9 substrate - 0.6048 60.48%
CYP2D6 substrate - 0.7537 75.37%
CYP3A4 inhibition - 0.9890 98.90%
CYP2C9 inhibition - 0.9672 96.72%
CYP2C19 inhibition - 0.9521 95.21%
CYP2D6 inhibition - 0.9267 92.67%
CYP1A2 inhibition - 0.9074 90.74%
CYP2C8 inhibition - 0.9801 98.01%
CYP inhibitory promiscuity - 0.9962 99.62%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8913 89.13%
Carcinogenicity (trinary) Non-required 0.7363 73.63%
Eye corrosion - 0.9393 93.93%
Eye irritation + 0.9348 93.48%
Skin irritation - 0.6297 62.97%
Skin corrosion - 0.8335 83.35%
Ames mutagenesis - 0.8154 81.54%
Human Ether-a-go-go-Related Gene inhibition - 0.7975 79.75%
Micronuclear - 0.6100 61.00%
Hepatotoxicity + 0.7000 70.00%
skin sensitisation - 0.8655 86.55%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.5333 53.33%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.6723 67.23%
Acute Oral Toxicity (c) III 0.5408 54.08%
Estrogen receptor binding - 0.9734 97.34%
Androgen receptor binding - 0.8255 82.55%
Thyroid receptor binding - 0.9246 92.46%
Glucocorticoid receptor binding - 0.9397 93.97%
Aromatase binding - 0.8469 84.69%
PPAR gamma - 0.7959 79.59%
Honey bee toxicity - 0.9264 92.64%
Biodegradation + 0.6250 62.50%
Crustacea aquatic toxicity - 0.8200 82.00%
Fish aquatic toxicity - 0.8652 86.52%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 97.19% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.10% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.32% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.27% 97.09%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 441442
LOTUS LTS0191571
wikiData Q27107119