Ryanodyl-3-pdc

Details

Top
Internal ID 503a090f-d5f4-432b-9ec9-8695046ac0ca
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name [(2R,3S,6S,7R,9R,10S,11S,12R,13S,14R)-2,6,9,11,13,14-hexahydroxy-3,7,10-trimethyl-11-propan-2-yl-15-oxapentacyclo[7.5.1.01,6.07,13.010,14]pentadecan-12-yl] pyridine-3-carboxylate
SMILES (Canonical) CC1CCC2(C3(CC4(C5(C(C(C3(C5(C2(C1O)O4)O)O)OC(=O)C6=CN=CC=C6)(C(C)C)O)C)O)C)O
SMILES (Isomeric) C[C@H]1CC[C@@]2([C@]3(C[C@@]4([C@]5([C@]([C@H]([C@@]3([C@]5(C2([C@@H]1O)O4)O)O)OC(=O)C6=CN=CC=C6)(C(C)C)O)C)O)C)O
InChI InChI=1S/C26H35NO9/c1-13(2)23(32)18(35-17(29)15-7-6-10-27-11-15)24(33)19(4)12-22(31)20(23,5)26(24,34)25(36-22)16(28)14(3)8-9-21(19,25)30/h6-7,10-11,13-14,16,18,28,30-34H,8-9,12H2,1-5H3/t14-,16+,18+,19+,20-,21-,22+,23+,24+,25?,26+/m0/s1
InChI Key BLVJZMYEPDTENS-FNAYAIJXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C26H35NO9
Molecular Weight 505.60 g/mol
Exact Mass 505.23118169 g/mol
Topological Polar Surface Area (TPSA) 170.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.12
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 3

Synonyms

Top
137441-82-8
Ryanodol, 3-(3-pyridinecarboxylate)
DTXSID50929797
4,6,7,8a,8b,9a-Hexahydroxy-3,6a,9-trimethyl-7-(propan-2-yl)dodecahydro-6,9-methanobenzo[1,2]pentaleno[1,6-bc]furan-8-yl pyridine-3-carboxylate

2D Structure

Top
2D Structure of Ryanodyl-3-pdc

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8317 83.17%
Caco-2 - 0.7850 78.50%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.5788 57.88%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8854 88.54%
OATP1B3 inhibitior + 0.9081 90.81%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7071 70.71%
BSEP inhibitior - 0.5783 57.83%
P-glycoprotein inhibitior - 0.5085 50.85%
P-glycoprotein substrate + 0.5556 55.56%
CYP3A4 substrate + 0.6577 65.77%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8561 85.61%
CYP3A4 inhibition - 0.7144 71.44%
CYP2C9 inhibition - 0.8870 88.70%
CYP2C19 inhibition - 0.8527 85.27%
CYP2D6 inhibition - 0.9358 93.58%
CYP1A2 inhibition - 0.7995 79.95%
CYP2C8 inhibition + 0.6772 67.72%
CYP inhibitory promiscuity - 0.9126 91.26%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.5742 57.42%
Eye corrosion - 0.9897 98.97%
Eye irritation - 0.9303 93.03%
Skin irritation - 0.7028 70.28%
Skin corrosion - 0.9189 91.89%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7039 70.39%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.5000 50.00%
skin sensitisation - 0.8547 85.47%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.8375 83.75%
Nephrotoxicity - 0.8590 85.90%
Acute Oral Toxicity (c) III 0.5959 59.59%
Estrogen receptor binding + 0.7779 77.79%
Androgen receptor binding + 0.7437 74.37%
Thyroid receptor binding + 0.6379 63.79%
Glucocorticoid receptor binding + 0.6950 69.50%
Aromatase binding + 0.7464 74.64%
PPAR gamma + 0.6082 60.82%
Honey bee toxicity - 0.8304 83.04%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5605 56.05%
Fish aquatic toxicity + 0.9078 90.78%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.75% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.21% 86.33%
CHEMBL2581 P07339 Cathepsin D 92.99% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.87% 99.23%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.81% 95.89%
CHEMBL2996 Q05655 Protein kinase C delta 88.79% 97.79%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 86.53% 85.30%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 86.30% 91.07%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.39% 89.00%
CHEMBL2535 P11166 Glucose transporter 84.02% 98.75%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 82.70% 96.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 82.36% 91.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.10% 100.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.73% 93.56%
CHEMBL221 P23219 Cyclooxygenase-1 81.41% 90.17%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.20% 100.00%
CHEMBL4208 P20618 Proteasome component C5 80.79% 90.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 80.39% 97.25%
CHEMBL5028 O14672 ADAM10 80.29% 97.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.28% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ryania speciosa

Cross-Links

Top
PubChem 5748312
LOTUS LTS0191600
wikiData Q82904903