Rutin trihydrate

Details

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Internal ID 5f4d7929-395e-423a-a659-d872f70aa9e7
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one;trihydrate
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OC3=C(OC4=CC(=CC(=C4C3=O)O)O)C5=CC(=C(C=C5)O)O)O)O)O)O)O)O.O.O.O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)OC3=C(OC4=CC(=CC(=C4C3=O)O)O)C5=CC(=C(C=C5)O)O)O)O)O)O)O)O.O.O.O
InChI InChI=1S/C27H30O16.3H2O/c1-8-17(32)20(35)22(37)26(40-8)39-7-15-18(33)21(36)23(38)27(42-15)43-25-19(34)16-13(31)5-10(28)6-14(16)41-24(25)9-2-3-11(29)12(30)4-9;;;/h2-6,8,15,17-18,20-23,26-33,35-38H,7H2,1H3;3*1H2/t8-,15+,17-,18+,20+,21-,22+,23+,26+,27-;;;/m0.../s1
InChI Key NLLBWFFSGHKUSY-JPRRWYCFSA-N
Popularity 255 references in papers

Physical and Chemical Properties

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Molecular Formula C27H36O19
Molecular Weight 664.60 g/mol
Exact Mass 664.18507891 g/mol
Topological Polar Surface Area (TPSA) 269.00 Ų
XlogP 0.00
Atomic LogP (AlogP) -4.16
H-Bond Acceptor 16
H-Bond Donor 10
Rotatable Bonds 6

Synonyms

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250249-75-3
Rutoside trihydrate
Rutin hydrate
Rutin (hydrate)
Rutin (trihydrate)
Quercetin-3-rutinoside trihydrate
207671-50-9
Rutoside trihydrate [EP]
UNII-RF4N03853G
RF4N03853G
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Rutin trihydrate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5679 56.79%
Caco-2 - 0.9269 92.69%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7477 74.77%
OATP2B1 inhibitior - 0.5616 56.16%
OATP1B1 inhibitior + 0.9117 91.17%
OATP1B3 inhibitior + 0.9151 91.51%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.6681 66.81%
P-glycoprotein inhibitior - 0.6165 61.65%
P-glycoprotein substrate - 0.5075 50.75%
CYP3A4 substrate + 0.6473 64.73%
CYP2C9 substrate - 0.7038 70.38%
CYP2D6 substrate - 0.8611 86.11%
CYP3A4 inhibition - 0.9249 92.49%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9545 95.45%
CYP1A2 inhibition - 0.8673 86.73%
CYP2C8 inhibition + 0.8737 87.37%
CYP inhibitory promiscuity - 0.6787 67.87%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6741 67.41%
Eye corrosion - 0.9910 99.10%
Eye irritation - 0.8973 89.73%
Skin irritation - 0.8025 80.25%
Skin corrosion - 0.9547 95.47%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3823 38.23%
Micronuclear + 0.7192 71.92%
Hepatotoxicity + 0.6625 66.25%
skin sensitisation - 0.9233 92.33%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.8983 89.83%
Acute Oral Toxicity (c) III 0.5971 59.71%
Estrogen receptor binding + 0.7901 79.01%
Androgen receptor binding + 0.6176 61.76%
Thyroid receptor binding + 0.5312 53.12%
Glucocorticoid receptor binding + 0.6215 62.15%
Aromatase binding + 0.6273 62.73%
PPAR gamma + 0.7234 72.34%
Honey bee toxicity - 0.7514 75.14%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5450 54.50%
Fish aquatic toxicity + 0.9005 90.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.58% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 98.60% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.80% 89.00%
CHEMBL2581 P07339 Cathepsin D 97.69% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.54% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 94.22% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.65% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.68% 96.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 91.47% 99.15%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 91.04% 95.64%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.29% 99.17%
CHEMBL3194 P02766 Transthyretin 84.94% 90.71%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.30% 95.56%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 83.73% 93.65%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.53% 94.80%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 81.54% 95.78%
CHEMBL4208 P20618 Proteasome component C5 81.49% 90.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 81.10% 97.36%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 80.33% 80.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides
Ginkgo biloba

Cross-Links

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PubChem 16218542
NPASS NPC155865