Rubrumline E

Details

Top
Internal ID 21bac338-47a0-46d8-9b67-c24636a4073a
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indoles
IUPAC Name (3Z)-3-[[5-[(2S)-2-hydroxy-3-methoxy-3-methylbutyl]-2-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]methylidene]-6-methylidenepiperazine-2,5-dione
SMILES (Canonical) CC(C)(C=C)C1=C(C2=C(N1)C=CC(=C2)CC(C(C)(C)OC)O)C=C3C(=O)NC(=C)C(=O)N3
SMILES (Isomeric) CC(C)(C=C)C1=C(C2=C(N1)C=CC(=C2)C[C@@H](C(C)(C)OC)O)/C=C\3/C(=O)NC(=C)C(=O)N3
InChI InChI=1S/C25H31N3O4/c1-8-24(3,4)21-17(13-19-23(31)26-14(2)22(30)28-19)16-11-15(9-10-18(16)27-21)12-20(29)25(5,6)32-7/h8-11,13,20,27,29H,1-2,12H2,3-7H3,(H,26,31)(H,28,30)/b19-13-/t20-/m0/s1
InChI Key FVZOTPZNUUTBPN-DTBYZMGXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C25H31N3O4
Molecular Weight 437.50 g/mol
Exact Mass 437.23145648 g/mol
Topological Polar Surface Area (TPSA) 103.00 Ų
XlogP 3.70
Atomic LogP (AlogP) 1.58
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

Top
(3Z)-3-[[5-[(2S)-2-hydroxy-3-methoxy-3-methylbutyl]-2-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]methylidene]-6-methylidenepiperazine-2,5-dione
(3Z)-3-((5-((2S)-2-hydroxy-3-methoxy-3-methylbutyl)-2-(2-methylbut-3-en-2-yl)-1H-indol-3-yl)methylidene)-6-methylidenepiperazine-2,5-dione
RefChem:180270
CHEMBL3417725
CHEBI:221231

2D Structure

Top
2D Structure of Rubrumline E

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9592 95.92%
Caco-2 - 0.7627 76.27%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.6291 62.91%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8360 83.60%
OATP1B3 inhibitior + 0.9297 92.97%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9361 93.61%
P-glycoprotein inhibitior + 0.5941 59.41%
P-glycoprotein substrate - 0.5566 55.66%
CYP3A4 substrate + 0.6260 62.60%
CYP2C9 substrate - 0.8024 80.24%
CYP2D6 substrate - 0.8414 84.14%
CYP3A4 inhibition + 0.5566 55.66%
CYP2C9 inhibition - 0.6685 66.85%
CYP2C19 inhibition - 0.7190 71.90%
CYP2D6 inhibition - 0.8702 87.02%
CYP1A2 inhibition + 0.5149 51.49%
CYP2C8 inhibition + 0.5869 58.69%
CYP inhibitory promiscuity - 0.5460 54.60%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5768 57.68%
Eye corrosion - 0.9869 98.69%
Eye irritation - 0.9101 91.01%
Skin irritation - 0.7783 77.83%
Skin corrosion - 0.9280 92.80%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7273 72.73%
Micronuclear + 0.6900 69.00%
Hepatotoxicity + 0.5298 52.98%
skin sensitisation - 0.8399 83.99%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.7375 73.75%
Nephrotoxicity - 0.8830 88.30%
Acute Oral Toxicity (c) III 0.5965 59.65%
Estrogen receptor binding + 0.7986 79.86%
Androgen receptor binding + 0.6274 62.74%
Thyroid receptor binding + 0.7660 76.60%
Glucocorticoid receptor binding + 0.6319 63.19%
Aromatase binding + 0.7166 71.66%
PPAR gamma + 0.7756 77.56%
Honey bee toxicity - 0.6707 67.07%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9136 91.36%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.54% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.44% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.78% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.73% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.68% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.95% 96.09%
CHEMBL2535 P11166 Glucose transporter 90.01% 98.75%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 88.33% 92.88%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.04% 97.25%
CHEMBL255 P29275 Adenosine A2b receptor 85.73% 98.59%
CHEMBL3401 O75469 Pregnane X receptor 85.61% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 83.76% 86.92%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.15% 95.89%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.39% 96.90%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.95% 95.50%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 80.86% 91.71%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.72% 94.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 118734969
LOTUS LTS0131493
wikiData Q77569970