Rubrumazine B

Details

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Internal ID f24aef12-0006-4cc5-a164-8ac82cb5ea27
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (3Z,6S)-3-[[7-[(2S)-2,3-dihydroxy-3-methylbutyl]-2-(2-methylbut-3-en-2-yl)-1H-indol-3-yl]methylidene]-6-methylpiperazine-2,5-dione
SMILES (Canonical) CC1C(=O)NC(=CC2=C(NC3=C(C=CC=C23)CC(C(C)(C)O)O)C(C)(C)C=C)C(=O)N1
SMILES (Isomeric) C[C@H]1C(=O)N/C(=C\C2=C(NC3=C(C=CC=C23)C[C@@H](C(C)(C)O)O)C(C)(C)C=C)/C(=O)N1
InChI InChI=1S/C24H31N3O4/c1-7-23(3,4)20-16(12-17-22(30)25-13(2)21(29)26-17)15-10-8-9-14(19(15)27-20)11-18(28)24(5,6)31/h7-10,12-13,18,27-28,31H,1,11H2,2-6H3,(H,25,30)(H,26,29)/b17-12-/t13-,18-/m0/s1
InChI Key BGZGVRPXCLBHLM-NRXXELKWSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C24H31N3O4
Molecular Weight 425.50 g/mol
Exact Mass 425.23145648 g/mol
Topological Polar Surface Area (TPSA) 114.00 Ų
XlogP 2.90
Atomic LogP (AlogP) 2.28
H-Bond Acceptor 4
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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CHEMBL3417728
1667747-16-1

2D Structure

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2D Structure of Rubrumazine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9721 97.21%
Caco-2 - 0.7555 75.55%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability + 0.6429 64.29%
Subcellular localzation Mitochondria 0.6734 67.34%
OATP2B1 inhibitior - 0.5708 57.08%
OATP1B1 inhibitior + 0.8697 86.97%
OATP1B3 inhibitior + 0.9310 93.10%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.8605 86.05%
P-glycoprotein inhibitior - 0.5988 59.88%
P-glycoprotein substrate + 0.5753 57.53%
CYP3A4 substrate + 0.6517 65.17%
CYP2C9 substrate - 0.8097 80.97%
CYP2D6 substrate - 0.8591 85.91%
CYP3A4 inhibition - 0.7302 73.02%
CYP2C9 inhibition - 0.6776 67.76%
CYP2C19 inhibition - 0.7164 71.64%
CYP2D6 inhibition - 0.8417 84.17%
CYP1A2 inhibition - 0.6010 60.10%
CYP2C8 inhibition + 0.5414 54.14%
CYP inhibitory promiscuity - 0.5508 55.08%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8700 87.00%
Carcinogenicity (trinary) Non-required 0.5954 59.54%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9674 96.74%
Skin irritation - 0.7734 77.34%
Skin corrosion - 0.9288 92.88%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6424 64.24%
Micronuclear + 0.7500 75.00%
Hepatotoxicity + 0.5962 59.62%
skin sensitisation - 0.8332 83.32%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.7638 76.38%
Acute Oral Toxicity (c) III 0.5787 57.87%
Estrogen receptor binding + 0.7015 70.15%
Androgen receptor binding + 0.7608 76.08%
Thyroid receptor binding + 0.7055 70.55%
Glucocorticoid receptor binding + 0.6055 60.55%
Aromatase binding + 0.5592 55.92%
PPAR gamma + 0.8261 82.61%
Honey bee toxicity - 0.7156 71.56%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9045 90.45%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.54% 97.25%
CHEMBL2581 P07339 Cathepsin D 98.75% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.74% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.57% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.25% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.36% 96.09%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 94.84% 92.88%
CHEMBL3401 O75469 Pregnane X receptor 88.90% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.88% 99.23%
CHEMBL5103 Q969S8 Histone deacetylase 10 88.72% 90.08%
CHEMBL1937 Q92769 Histone deacetylase 2 88.00% 94.75%
CHEMBL3310 Q96DB2 Histone deacetylase 11 86.39% 88.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.56% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 84.67% 91.49%
CHEMBL2179 P04062 Beta-glucocerebrosidase 84.06% 85.31%
CHEMBL1907 P15144 Aminopeptidase N 83.50% 93.31%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.58% 93.03%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.50% 97.09%
CHEMBL2535 P11166 Glucose transporter 82.12% 98.75%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 81.85% 94.23%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.11% 93.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 118734972
LOTUS LTS0258610
wikiData Q77511444